RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 MPPE1Q53F39 396 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 GPR158Q5T848 1215 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 PDE12Q6L8Q7 609 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 CYB5D1Q6P9G0 228 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 TMEM207Q6UWW9 146 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 PIM3Q86V86 326 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 WDR75Q8IWA0 830 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 ANKRD49Q8WVL7 239 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 TM6SF2Q9BZW4 377 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 SAR1AQ9NR31 198 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 CATSPERZQ9NTU4 200 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 MID2Q9UJV3 735 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 ZNF510Q9Y2H8 683 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 ANKRD36A6QL64 1941 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 ZNF195O14628 629 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 ATP5HO75947 161 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 WISP3O95389 354 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 TIAL1Q01085 375 aaKnown RBP eCLIP17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 TUBB3Q13509 450 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 LIPMQ5VYY2 423 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 MRNIPQ6NTE8 343 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 EFHBQ8N7U6 833 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 ZNF781Q8N8C0 355 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 OR6K2Q8NGY2 324 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 SGF29Q96ES7 293 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 LRMDAQ9H2I8 198 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 GPAMQ9HCL2 828 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 INTS6Q9UL03 887 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 ARHGAP26Q9UNA1 814 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 TMEM114B3SHH9 223 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 HSPA4LO95757 839 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 CHRNGP07510 517 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 CCDC166P0CW27 439 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 PSMA3P25788 255 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 GRIA4P48058 902 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 USP4Q13107 963 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 TEAD2Q15562 447 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 SLC5A9Q2M3M2 681 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 TSNAXIP1Q2TAA8 658 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 MPP7Q5T2T1 576 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 Q7L0L9 218 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 CMTM8Q8IZV2 173 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 UTP4Q969X6 686 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 MRPL38Q96DV4 380 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 PTCD3Q96EY7 689 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 UBXN10Q96LJ8 280 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 C2orf49Q9BVC5 232 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 ADGRE3Q9BY15 652 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 MRPL46Q9H2W6 279 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 MAN1C1Q9NR34 630 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 FZD6O60353 706 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 PRAMEF12O95522 483 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 STC1P52823 247 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 EPHA5P54756 1037 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 NAGLUP54802 743 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 VWA5B1Q5TIE3 1220 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 TXNDC5Q8NBS9 432 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 FIBINQ8TAL6 211 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 TTC8Q8TAM2 541 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 TSPAN17Q96FV3 270 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 RILPQ96NA2 401 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 MRPL57Q9BQC6 102 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 KLC4Q9NSK0 619 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 POLR3BQ9NW08 1133 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 PCDHB9Q9Y5E1 797 aa17.05■□□□□ 0.32
SHKBP1-216ENST00000598201 NEMP2A6NFY4 417 aa17.04■□□□□ 0.32
SHKBP1-216ENST00000598201 C2orf81A6NN90 581 aa17.04■□□□□ 0.32
SHKBP1-216ENST00000598201 H2AFYO75367 372 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-216ENST00000598201 LTA4HP09960 611 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-216ENST00000598201 ALOX15P16050 662 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-216ENST00000598201 EPCAMP16422 314 aa17.04■□□□□ 0.32
SHKBP1-216ENST00000598201 OGNP20774 298 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-216ENST00000598201 LPOP22079 712 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-216ENST00000598201 GKP32189 559 aa17.04■□□□□ 0.32
SHKBP1-216ENST00000598201 CDKN1CP49918 316 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-216ENST00000598201 TYSND1Q2T9J0 566 aa17.04■□□□□ 0.32
SHKBP1-216ENST00000598201 TECRLQ5HYJ1 363 aa17.04■□□□□ 0.32
SHKBP1-216ENST00000598201 RETSATQ6NUM9 610 aa17.04■□□□□ 0.32
SHKBP1-216ENST00000598201 TREML1Q86YW5 311 aa17.04■□□□□ 0.32
SHKBP1-216ENST00000598201 CAMK1DQ8IU85 385 aa17.04■□□□□ 0.32
SHKBP1-216ENST00000598201 TTC30BQ8N4P2 665 aa17.04■□□□□ 0.32
SHKBP1-216ENST00000598201 SREK1Q8WXA9 508 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-216ENST00000598201 SIKE1Q9BRV8 207 aa17.04■□□□□ 0.32
SHKBP1-216ENST00000598201 TLE6Q9H808 572 aa17.04■□□□□ 0.32
SHKBP1-216ENST00000598201 BPIFA1Q9NP55 256 aa17.04■□□□□ 0.32
SHKBP1-216ENST00000598201 ZNF821O75541 412 aaPredicted RBP17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 RHOP08100 348 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 FDXRP22570 491 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 IDH3AP50213 366 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 NTHL1P78549 312 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 FAM83EQ2M2I3 478 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 PLEKHG6Q3KR16 790 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 FAM91A1Q658Y4 838 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 FAM45BPQ6NSW5 357 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 DEFB123Q8N688 67 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 FAM45AQ8TCE6 357 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 AGR3Q8TD06 166 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 USP13Q92995 863 aaPredicted RBP17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 ACDQ96AP0 544 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms