RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 PNCKQ6P2M8 343 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 Q6ZVL8 140 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 HSD11B1LQ7Z5J1 315 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 TECPR1Q7Z6L1 1165 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 SLCO6A1Q86UG4 719 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 LPCAT1Q8NF37 534 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 SPATA22Q8NHS9 363 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 NUS1Q96E22 293 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 DTD2Q96FN9 168 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 TRIB3Q96RU7 358 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 LYSMD1Q96S90 227 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 VAT1Q99536 393 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 ADGRE3Q9BY15 652 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 TOR4AQ9NXH8 423 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 FTSJ1Q9UET6 329 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 DNPEPQ9ULA0 475 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 WASF3Q9UPY6 502 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 OR1A2Q9Y585 309 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 H3BM21 787 aa16.73■□□□□ 0.27
SSBP4-204ENST00000597724 H7C0C1 242 aa16.73■□□□□ 0.27
SSBP4-204ENST00000597724 NRDCO43847 1150 aa16.73■□□□□ 0.27
SSBP4-204ENST00000597724 TRIM16O95361 564 aa16.73■□□□□ 0.27
SSBP4-204ENST00000597724 LDOC1O95751 146 aaPredicted RBP16.73■□□□□ 0.27
SSBP4-204ENST00000597724 HOXC4P09017 264 aaPredicted RBP16.73■□□□□ 0.27
SSBP4-204ENST00000597724 ATXN1LP0C7T5 689 aaKnown RBP16.73■□□□□ 0.27
SSBP4-204ENST00000597724 GIMD1P0DJR0 217 aa16.73■□□□□ 0.27
SSBP4-204ENST00000597724 JUNDP17535 347 aa16.73■□□□□ 0.27
SSBP4-204ENST00000597724 RBL1P28749 1068 aa16.73■□□□□ 0.27
SSBP4-204ENST00000597724 ATP5OP48047 213 aa16.73■□□□□ 0.27
SSBP4-204ENST00000597724 NFATC4Q14934 902 aa16.73■□□□□ 0.27
SSBP4-204ENST00000597724 QPCTQ16769 361 aa16.73■□□□□ 0.27
SSBP4-204ENST00000597724 ZNF567Q8N184 647 aa16.73■□□□□ 0.27
SSBP4-204ENST00000597724 PELI3Q8N2H9 469 aa16.73■□□□□ 0.27
SSBP4-204ENST00000597724 BTN2A2Q8WVV5 523 aa16.73■□□□□ 0.27
SSBP4-204ENST00000597724 FUBP1Q96AE4 644 aaKnown RBP16.73■□□□□ 0.27
SSBP4-204ENST00000597724 MLPHQ9BV36 600 aaPredicted RBP16.73■□□□□ 0.27
SSBP4-204ENST00000597724 C10orf88Q9H8K7 445 aa16.73■□□□□ 0.27
SSBP4-204ENST00000597724 TRHDEQ9UKU6 1024 aa16.73■□□□□ 0.27
SSBP4-204ENST00000597724 APOBEC2Q9Y235 224 aaKnown RBP16.73■□□□□ 0.27
SSBP4-204ENST00000597724 K7ESM1 405 aa16.72■□□□□ 0.27
SSBP4-204ENST00000597724 SCAMP1O15126 338 aa16.72■□□□□ 0.27
SSBP4-204ENST00000597724 DKK1O94907 266 aa16.72■□□□□ 0.27
SSBP4-204ENST00000597724 CLDN7O95471 211 aa16.72■□□□□ 0.27
SSBP4-204ENST00000597724 MT-CYBP00156 380 aaPredicted RBP16.72■□□□□ 0.27
SSBP4-204ENST00000597724 RBP3P10745 1247 aa16.72■□□□□ 0.27
SSBP4-204ENST00000597724 NFKB1P19838 968 aa16.72■□□□□ 0.27
SSBP4-204ENST00000597724 HTR1BP28222 390 aa16.72■□□□□ 0.27
SSBP4-204ENST00000597724 STC1P52823 247 aa16.72■□□□□ 0.27
SSBP4-204ENST00000597724 EIF3EP60228 445 aaKnown RBP16.72■□□□□ 0.27
SSBP4-204ENST00000597724 SHC2P98077 582 aa16.72■□□□□ 0.27
SSBP4-204ENST00000597724 CDK18Q07002 472 aa16.72■□□□□ 0.27
SSBP4-204ENST00000597724 FOXC1Q12948 553 aa16.72■□□□□ 0.27
SSBP4-204ENST00000597724 CDKN3Q16667 212 aa16.72■□□□□ 0.27
SSBP4-204ENST00000597724 PID1Q7Z2X4 250 aa16.72■□□□□ 0.27
SSBP4-204ENST00000597724 KDELC2Q7Z4H8 507 aa16.72■□□□□ 0.27
SSBP4-204ENST00000597724 PHACTR4Q8IZ21 702 aa16.72■□□□□ 0.27
SSBP4-204ENST00000597724 PNPLA1Q8N8W4 532 aa16.72■□□□□ 0.27
SSBP4-204ENST00000597724 ZNF548Q8NEK5 533 aaPredicted RBP16.72■□□□□ 0.27
SSBP4-204ENST00000597724 OR4C6Q8NH72 309 aa16.72■□□□□ 0.27
SSBP4-204ENST00000597724 CNDP2Q96KP4 475 aaKnown RBP16.72■□□□□ 0.27
SSBP4-204ENST00000597724 FAM118BQ9BPY3 351 aa16.72■□□□□ 0.27
SSBP4-204ENST00000597724 TCEAL2Q9H3H9 227 aaPredicted RBP16.72■□□□□ 0.27
SSBP4-204ENST00000597724 LZTFL1Q9NQ48 299 aa16.72■□□□□ 0.27
SSBP4-204ENST00000597724 KLHL8Q9P2G9 620 aaPredicted RBP16.72■□□□□ 0.27
SSBP4-204ENST00000597724 CSNK1G3Q9Y6M4 447 aa16.72■□□□□ 0.27
SSBP4-204ENST00000597724 GOLGA6L9A6NEM1 432 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 NEMP2A6NFY4 417 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 TRIM38O00635 465 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 ENC1O14682 589 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 AQP9O43315 295 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 SIGLEC6O43699 453 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 TOP3BO95985 862 aaKnown RBP16.71■□□□□ 0.27
SSBP4-204ENST00000597724 C1SP09871 688 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 TSHRP16473 764 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 KIAA1024LP59773 190 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 PPARDQ03181 441 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 DPTQ07507 201 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 KLF1Q13351 362 aaPredicted RBP16.71■□□□□ 0.27
SSBP4-204ENST00000597724 GALNT3Q14435 633 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 PCSK7Q16549 785 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 FAXCQ5TGI0 409 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 ENPP7Q6UWV6 458 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 RFLNAQ6ZTI6 216 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 RAB44Q7Z6P3 723 aaPredicted RBP16.71■□□□□ 0.27
SSBP4-204ENST00000597724 NLRP8Q86W28 1048 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 CDKL3Q8IVW4 592 aaPredicted RBP16.71■□□□□ 0.27
SSBP4-204ENST00000597724 RAVER1Q8IY67 606 aaKnown RBP16.71■□□□□ 0.27
SSBP4-204ENST00000597724 RBFAQ8N0V3 343 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 ATL2Q8NHH9 583 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 ADAMTS14Q8WXS8 1223 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 TSACCQ96A04 125 aaPredicted RBP16.71■□□□□ 0.27
SSBP4-204ENST00000597724 TBATAQ96M53 351 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 WDR92Q96MX6 357 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 FCRL5Q96RD9 977 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 FERMT1Q9BQL6 677 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 LGR4Q9BXB1 951 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 SLC13A1Q9BZW2 595 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 ABCG8Q9H221 673 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 WDR26Q9H7D7 661 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 NLGN3Q9NZ94 848 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms