RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 LSMEM2Q8N112 164 aa17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 OR6C4Q8NGE1 309 aa17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 HNRNPLLQ8WVV9 542 aaKnown RBP17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 RAPGEF5Q92565 580 aa17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 FGF11Q92914 225 aa17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 HDAC11Q96DB2 347 aa17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 DTD2Q96FN9 168 aa17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 PDXPQ96GD0 296 aa17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 LGR4Q9BXB1 951 aa17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 TEX101Q9BY14 249 aa17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 FGF22Q9HCT0 170 aa17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 RBM22Q9NW64 420 aaKnown RBP eCLIP17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 RALYQ9UKM9 306 aaKnown RBP17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 GPR34Q9UPC5 381 aa17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 URB1O60287 2271 aaKnown RBP17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 DXOO77932 396 aaKnown RBP17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 PDHA1P08559 390 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 MYCLP1P12525 358 aaPredicted RBP17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 CCNB1P14635 433 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 LSSP48449 732 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 GBE1Q04446 702 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 DPTQ07507 201 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 ITKQ08881 620 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 SLC10A2Q12908 348 aaPredicted RBP17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 TBX2Q13207 712 aaPredicted RBP17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 ARHGEF7Q14155 803 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 TBC1D25Q3MII6 688 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 LRRC38Q5VT99 294 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 KCTD16Q68DU8 428 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 OGFOD3Q6PK18 319 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 IGF2-ASQ6U949 168 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 RBM44Q6ZP01 1051 aaKnown RBP17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 NYAP1Q6ZVC0 841 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 HSD11B1LQ7Z5J1 315 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 TECPR1Q7Z6L1 1165 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 NLRP8Q86W28 1048 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 RAVER1Q8IY67 606 aaKnown RBP17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 PELI3Q8N2H9 469 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 RNF214Q8ND24 703 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 GPR156Q8NFN8 814 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 ZNF578Q96N58 590 aaPredicted RBP17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 PHPT1Q9NRX4 125 aaPredicted RBP17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 SPTLC3Q9NUV7 552 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 DTLQ9NZJ0 730 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 DNPEPQ9ULA0 475 aa17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 DSPP15924 2871 aaKnown RBP17.93■□□□□ 0.46
CHMP2A-203ENST00000597209 AKR1B15C9JRZ8 316 aaPredicted RBP17.92■□□□□ 0.46
CHMP2A-203ENST00000597209 USP12O75317 370 aa17.92■□□□□ 0.46
CHMP2A-203ENST00000597209 ZNF30P17039 623 aa17.92■□□□□ 0.46
CHMP2A-203ENST00000597209 CA4P22748 312 aa17.92■□□□□ 0.46
CHMP2A-203ENST00000597209 ETV3P41162 512 aa17.92■□□□□ 0.46
CHMP2A-203ENST00000597209 SLC1A1P43005 524 aa17.92■□□□□ 0.46
CHMP2A-203ENST00000597209 RPL26P61254 145 aaKnown RBP17.92■□□□□ 0.46
CHMP2A-203ENST00000597209 IHHQ14623 411 aa17.92■□□□□ 0.46
CHMP2A-203ENST00000597209 ZFYVE27Q5T4F4 411 aa17.92■□□□□ 0.46
CHMP2A-203ENST00000597209 SLC9A4Q6AI14 798 aa17.92■□□□□ 0.46
CHMP2A-203ENST00000597209 SARM1Q6SZW1 724 aa17.92■□□□□ 0.46
CHMP2A-203ENST00000597209 CCDC13Q8IYE1 715 aa17.92■□□□□ 0.46
CHMP2A-203ENST00000597209 KYQ8NBH2 561 aa17.92■□□□□ 0.46
CHMP2A-203ENST00000597209 ARRDC2Q8TBH0 407 aa17.92■□□□□ 0.46
CHMP2A-203ENST00000597209 CCDC3Q9BQI4 270 aa17.92■□□□□ 0.46
CHMP2A-203ENST00000597209 TDRD1Q9BXT4 1180 aaKnown RBP17.92■□□□□ 0.46
CHMP2A-203ENST00000597209 POLR1BQ9H9Y6 1135 aa17.92■□□□□ 0.46
CHMP2A-203ENST00000597209 GULP1Q9UBP9 304 aa17.92■□□□□ 0.46
CHMP2A-203ENST00000597209 RPL26L1Q9UNX3 145 aaKnown RBP17.92■□□□□ 0.46
CHMP2A-203ENST00000597209 ASXL3Q9C0F0 2248 aa17.92■□□□□ 0.46
CHMP2A-203ENST00000597209 A0A0J9YYE9 177 aa17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 PRSS38A1L453 326 aa17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 C3orf70A6NLC5 250 aaPredicted RBP17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 NTN3O00634 580 aaPredicted RBP17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 RRP8O43159 456 aaKnown RBP17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 MAP3K6O95382 1288 aa17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 TRBC1P01850 177 aa17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 ABCG1P45844 678 aa17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 DSC2Q02487 901 aa17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 PPIDQ08752 370 aaKnown RBP17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 DENND2CQ68D51 928 aa17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 CRTC1Q6UUV9 634 aa17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 LRRC69Q6ZNQ3 347 aa17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 Q6ZVL8 140 aa17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 ZNF765Q7L2R6 523 aa17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 TSPAN33Q86UF1 283 aa17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 PDZD3Q86UT5 571 aa17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 PLD5Q8N7P1 536 aa17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 ZNF830Q96NB3 372 aaPredicted RBP17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 LYSMD1Q96S90 227 aa17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 CYP4F12Q9HCS2 524 aa17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 MRPL40Q9NQ50 206 aaKnown RBP17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 ENTPD2Q9Y5L3 495 aa17.91■□□□□ 0.46
CHMP2A-203ENST00000597209 LRRD1A4D1F6 860 aa17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 PRLP01236 227 aa17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 HLA-DQB2P05538 268 aa17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 CEACAM5P06731 702 aa17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 PNLIPP16233 465 aa17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 ZFXP17010 805 aaPredicted RBP17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 CTPS1P17812 591 aa17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 ERVPABLB-1P60509 514 aa17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 GABREP78334 506 aa17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 IFI35P80217 286 aaPredicted RBP17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 CDK3Q00526 305 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms