RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 FZD3Q9NPG1 666 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 SEPT10Q9P0V9 454 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 SPENQ96T58 3664 aaKnown RBP12.97□□□□□ -0.33
SCAF1-202ENST00000595242 SDK2Q58EX2 2172 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 RP1L1Q8IWN7 2480 aaPredicted RBP12.97□□□□□ -0.33
SCAF1-202ENST00000595242 C2CD3Q4AC94 2353 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 MED13Q9UHV7 2174 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 A0A1W2PQU0 124 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 MUSKO15146 869 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 POLR3GO15318 223 aaPredicted RBP12.96□□□□□ -0.33
SCAF1-202ENST00000595242 ACSL4O60488 711 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 PDGFRAP16234 1089 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 UGT1A5P35504 534 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 NNMTP40261 264 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 RGS7P49802 495 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 EIF3BP55884 814 aaKnown RBP12.96□□□□□ -0.33
SCAF1-202ENST00000595242 TAS2R38P59533 333 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 DHX9Q08211 1270 aaKnown RBP12.96□□□□□ -0.33
SCAF1-202ENST00000595242 CALCOCO2Q13137 446 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 SLMAPQ14BN4 828 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 NR0B2Q15466 257 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 CCDC14Q49A88 953 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 Q6ZSR6 202 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 DSG4Q86SJ6 1040 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 VASH2Q86V25 355 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 UNC45BQ8IWX7 931 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 APCDD1Q8J025 514 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 CFAP52Q8N1V2 620 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 FBXO39Q8N4B4 442 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 CCDC89Q8N998 374 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 HTR3CQ8WXA8 447 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 CENPIQ92674 756 aaPredicted RBP12.96□□□□□ -0.33
SCAF1-202ENST00000595242 MYEOVQ96EZ4 313 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 LIN37Q96GY3 246 aaPredicted RBP12.96□□□□□ -0.33
SCAF1-202ENST00000595242 PEBP4Q96S96 227 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 FOXP3Q9BZS1 431 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 TSPYL1Q9H0U9 437 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 EPB41L4BQ9H329 900 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 SYNDIG1Q9H7V2 258 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 VPS18Q9P253 973 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 SRPK3Q9UPE1 567 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 PLAAQ9Y263 795 aa12.96□□□□□ -0.33
SCAF1-202ENST00000595242 CELSR2Q9HCU4 2923 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 YJEFN3A6XGL0 299 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 E7ENQ6 273 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 NDC80O14777 642 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 IGLV3-27P01718 113 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 CSF2P04141 144 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 NME1P15531 152 aaKnown RBP12.95□□□□□ -0.34
SCAF1-202ENST00000595242 DESP17661 470 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 WT1P19544 449 aaPredicted RBP12.95□□□□□ -0.34
SCAF1-202ENST00000595242 HNRNPA2B1P22626 353 aaKnown RBP12.95□□□□□ -0.34
SCAF1-202ENST00000595242 AKT2P31751 481 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 NUMBP49757 651 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 PLTPP55058 493 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 SLC8A3P57103 927 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 EIF3IQ13347 325 aaKnown RBP12.95□□□□□ -0.34
SCAF1-202ENST00000595242 SNX1Q13596 522 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 PDK2Q15119 407 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 DEFB133Q30KQ1 61 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 ODF2Q5BJF6 829 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 TTMPQ5BVD1 217 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 NUGGCQ68CJ6 796 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 NADSYN1Q6IA69 706 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 GCNT7Q6ZNI0 430 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 RAB11FIP2Q7L804 512 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 WDR48Q8TAF3 677 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 OR8D1Q8WZ84 308 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 ZWILCHQ9H900 591 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 ABCC13Q9NSE7 274 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 PLEKHB1Q9UF11 243 aaPredicted RBP12.95□□□□□ -0.34
SCAF1-202ENST00000595242 ADAM21Q9UKJ8 722 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 PPM1HQ9ULR3 514 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 CSNK1G3Q9Y6M4 447 aa12.95□□□□□ -0.34
SCAF1-202ENST00000595242 H3BM21 787 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 APOC4-APOC2K7ER74 178 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 NVLO15381 856 aaKnown RBP12.94□□□□□ -0.34
SCAF1-202ENST00000595242 DAB1O75553 588 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 LUC7L3O95232 432 aaKnown RBP12.94□□□□□ -0.34
SCAF1-202ENST00000595242 APOC2P02655 101 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 HGFP14210 728 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 SDC4P31431 198 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 PMS2P54278 862 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 ADIGQ0VDE8 80 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 FZD2Q14332 565 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 ZNF284Q2VY69 593 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 BOLA3Q53S33 107 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 EFHC1Q5JVL4 640 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 NEK5Q6P3R8 708 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 BNIPLQ7Z465 357 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 PTAR1Q7Z6K3 402 aaPredicted RBP12.94□□□□□ -0.34
SCAF1-202ENST00000595242 ABI3BPQ7Z7G0 1075 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 B3GNT8Q7Z7M8 397 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 DCP2Q8IU60 420 aaKnown RBP12.94□□□□□ -0.34
SCAF1-202ENST00000595242 RELL1Q8IUW5 271 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 FRS2Q8WU20 508 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 AZIN2Q96A70 460 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 FAF2Q96CS3 445 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 CCDC114Q96M63 670 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 IL12RB2Q99665 862 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms