RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 ZC3HC1Q86WB0 502 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 DENND1CQ8IV53 801 aa17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 FBXW8Q8N3Y1 598 aa17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 PGBD5Q8N414 524 aa17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 ADCY4Q8NFM4 1077 aa17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 SHKBP1Q8TBC3 707 aa17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 ISL2Q96A47 359 aa17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 MCMBPQ9BTE3 642 aa17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 THAP1Q9NVV9 213 aa17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 COPG2Q9UBF2 871 aa17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 DOCK4Q8N1I0 1966 aa17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 ZNF840PA6NDX5 716 aa17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 PHGDHO43175 533 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 MMP2P08253 660 aa17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 HARS2P49590 506 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 KPNA1P52294 538 aaPredicted RBP17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 NAA20P61599 178 aa17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 PARP15Q460N3 678 aa17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 RALGPS1Q5JS13 557 aa17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 GKN1Q9NS71 199 aa17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 UXTQ9UBK9 157 aaPredicted RBP17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 GREB1Q4ZG55 1949 aa17.11■□□□□ 0.33
SHKBP1-205ENST00000594973 COCHO43405 550 aa17.11■□□□□ 0.33
SHKBP1-205ENST00000594973 MPOP05164 745 aa17.11■□□□□ 0.33
SHKBP1-205ENST00000594973 ZNF12P17014 697 aa17.11■□□□□ 0.33
SHKBP1-205ENST00000594973 PPARGP37231 505 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-205ENST00000594973 ALDH3B2P48448 385 aa17.11■□□□□ 0.33
SHKBP1-205ENST00000594973 SLC1A6P48664 564 aa17.11■□□□□ 0.33
SHKBP1-205ENST00000594973 MNX1P50219 401 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-205ENST00000594973 USP10Q14694 798 aaKnown RBP17.11■□□□□ 0.33
SHKBP1-205ENST00000594973 TAF12Q16514 161 aa17.11■□□□□ 0.33
SHKBP1-205ENST00000594973 ZNF470Q6ECI4 717 aa17.11■□□□□ 0.33
SHKBP1-205ENST00000594973 TICAM1Q8IUC6 712 aa17.11■□□□□ 0.33
SHKBP1-205ENST00000594973 RHOJQ9H4E5 214 aa17.11■□□□□ 0.33
SHKBP1-205ENST00000594973 TMEM39AQ9NV64 488 aa17.11■□□□□ 0.33
SHKBP1-205ENST00000594973 BACE2Q9Y5Z0 518 aa17.11■□□□□ 0.33
SHKBP1-205ENST00000594973 ACTL7AQ9Y615 435 aa17.11■□□□□ 0.33
SHKBP1-205ENST00000594973 ZFP37Q9Y6Q3 630 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-205ENST00000594973 ACSL4O60488 711 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 EFEMP2O95967 443 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 IRF1P10914 325 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 SLC1A2P43004 574 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 SERPINH1P50454 418 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 RPS24P62847 133 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 IL10RBQ08334 325 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 ZNF460Q14592 562 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 CCDC153Q494R4 210 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 HECTD3Q5T447 861 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 IYDQ6PHW0 289 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 SLC41A1Q8IVJ1 513 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 ZNF461Q8TAF7 563 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 CNBD2Q96M20 576 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 GPR22Q99680 433 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 TREX1Q9NSU2 369 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 TBC1D23Q9NUY8 699 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 NSMCE4AQ9NXX6 385 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 APPL1Q9UKG1 709 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 FBP2O00757 339 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 PARNO95453 639 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 HMGA1P17096 107 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 PAMP19021 973 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 PLD1Q13393 1074 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 ZNF423Q2M1K9 1284 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 CNKSR3Q6P9H4 555 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 TEX26Q8N6G2 289 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 PNPLA1Q8N8W4 532 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 PTCD2Q8WV60 388 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 AUTS2Q8WXX7 1259 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 VWCEQ96DN2 955 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 CDK5RAP1Q96SZ6 601 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 SEMA3CQ99985 751 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 SLC2A11Q9BYW1 496 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 VPS45Q9NRW7 570 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 AFF4Q9UHB7 1163 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 TLK1Q9UKI8 766 aa17.1■□□□□ 0.33
SHKBP1-205ENST00000594973 SCAMP3O14828 347 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 MUSKO15146 869 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 CAPNS1P04632 268 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 THRAP10827 490 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 RALBP11234 206 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 MYL4P12829 197 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 MAPKAPK2P49137 400 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 SLC11A2P49281 568 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 TUBB3Q13509 450 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 ZNF235Q14590 738 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 IL31Q6EBC2 164 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 ZFP1Q6P2D0 407 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 LPCAT2Q7L5N7 544 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 OR7D4Q8NG98 312 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 OR52K2Q8NGK3 314 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 ARRDC2Q8TBH0 407 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 CMTM5Q96DZ9 223 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 TMEM169Q96HH4 297 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 LRGUKQ96M69 825 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 SPON2Q9BUD6 331 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 TASP1Q9H6P5 420 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 KIAA1522Q9P206 1035 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 DNAJC16Q9Y2G8 782 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 TANC1Q9C0D5 1861 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 CCL22O00626 93 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms