RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 TOR1BO14657 336 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 ARHGAP6O43182 974 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 TCEA3O75764 348 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 PALMO75781 387 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 RASGRP1O95267 797 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 TNFP01375 233 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 CD48P09326 243 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 COMTP21964 271 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 AMPD1P23109 780 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 IL4RP24394 825 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 SERPINB6P35237 376 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 BLKP51451 505 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 SKOR1P84550 965 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 VAC14Q08AM6 782 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 RALGDSQ12967 914 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 MMRN1Q13201 1228 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 NFATC4Q14934 902 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 ELOCQ15369 112 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 KIAA1614Q5VZ46 1190 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 IGF2-ASQ6U949 168 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 ZNF605Q86T29 641 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 VSIG1Q86XK7 387 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 ARHGAP12Q8IWW6 846 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 PELI3Q8N2H9 469 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 SDR16C5Q8N3Y7 309 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 FSTL5Q8N475 847 aaPredicted RBP12.54□□□□□ -0.4
UPF1-203ENST00000594504 NPWQ8N729 165 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 WDR36Q8NI36 951 aaKnown RBP12.54□□□□□ -0.4
UPF1-203ENST00000594504 HCAR2Q8TDS4 363 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 NAT6Q93015 286 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 PDXPQ96GD0 296 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 ZNF641Q96N77 438 aaPredicted RBP12.54□□□□□ -0.4
UPF1-203ENST00000594504 DESI2Q9BSY9 194 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 DPH1Q9BZG8 443 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 FOXP3Q9BZS1 431 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 LACRTQ9GZZ8 138 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 KLQ9UEF7 1012 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 PCDHGA8Q9Y5G5 932 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 ALG6Q9Y672 507 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 LOC400499M0QZD8 3231 aa12.54□□□□□ -0.4
UPF1-203ENST00000594504 CCDC187A0A096LP49 1063 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 LRRD1A4D1F6 860 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 TMEM202A6NGA9 273 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 ERVH48-1M5A8F1 160 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 DFFAO00273 331 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 PSTPIP1O43586 416 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 NRDCO43847 1150 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 RECQL5O94762 991 aaPredicted RBP12.53□□□□□ -0.4
UPF1-203ENST00000594504 RPLP0P05388 317 aaKnown RBP12.53□□□□□ -0.4
UPF1-203ENST00000594504 ALPIP09923 528 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 HGFP14210 728 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 PLA2G2AP14555 144 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 GM2AP17900 193 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 KDELR1P24390 212 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 HTR1BP28222 390 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 MMP12P39900 470 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 SUOXP51687 545 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 NAP1L1P55209 391 aaKnown RBP12.53□□□□□ -0.4
UPF1-203ENST00000594504 KIF5AQ12840 1032 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 ANKRD20A8PQ5CZ79 823 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 CFAP58Q5T655 872 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 ERAP2Q6P179 960 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 LIPIQ6XZB0 460 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 DAAM2Q86T65 1068 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 GKN2Q86XP6 184 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 LRRC8AQ8IWT6 810 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 ARL10Q8N8L6 244 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 Q8N9G6 341 aaPredicted RBP12.53□□□□□ -0.4
UPF1-203ENST00000594504 CCL4L1Q8NHW4 92 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 SCG3Q8WXD2 468 aaKnown RBP12.53□□□□□ -0.4
UPF1-203ENST00000594504 OR1E3Q8WZA6 343 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 RAPGEF5Q92565 580 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 TTC9Q92623 222 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 ANP32BQ92688 251 aaKnown RBP12.53□□□□□ -0.4
UPF1-203ENST00000594504 GRAMD1AQ96CP6 724 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 FAF2Q96CS3 445 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 WDR92Q96MX6 357 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 GFM1Q96RP9 751 aaKnown RBP12.53□□□□□ -0.4
UPF1-203ENST00000594504 LGR4Q9BXB1 951 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 EPB41L5Q9HCM4 733 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 ETNK2Q9NVF9 386 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 DDX56Q9NY93 547 aaKnown RBP12.53□□□□□ -0.4
UPF1-203ENST00000594504 ATXN7L1Q9ULK2 861 aaPredicted RBP12.53□□□□□ -0.4
UPF1-203ENST00000594504 SSUH2Q9Y2M2 353 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 ATP8A1Q9Y2Q0 1164 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 HYOU1Q9Y4L1 999 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 DUSP10Q9Y6W6 482 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 ATRXP46100 2492 aa12.53□□□□□ -0.4
UPF1-203ENST00000594504 EFSO43281 561 aa12.52□□□□□ -0.41
UPF1-203ENST00000594504 KRT1P04264 644 aa12.52□□□□□ -0.41
UPF1-203ENST00000594504 CSNK1DP48730 415 aa12.52□□□□□ -0.41
UPF1-203ENST00000594504 SCNN1BP51168 640 aa12.52□□□□□ -0.41
UPF1-203ENST00000594504 UCNP55089 124 aa12.52□□□□□ -0.41
UPF1-203ENST00000594504 RHDQ02161 417 aa12.52□□□□□ -0.41
UPF1-203ENST00000594504 BCL2L1Q07817 233 aa12.52□□□□□ -0.41
UPF1-203ENST00000594504 SRSF6Q13247 344 aaKnown RBP12.52□□□□□ -0.41
UPF1-203ENST00000594504 CLN3Q13286 438 aa12.52□□□□□ -0.41
UPF1-203ENST00000594504 GRM3Q14832 879 aa12.52□□□□□ -0.41
UPF1-203ENST00000594504 AGERQ15109 404 aa12.52□□□□□ -0.41
UPF1-203ENST00000594504 IFI16Q16666 785 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms