RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 SUOXP51687 545 aa16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 C1QTNF8P60827 252 aa16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 SEMA3AQ14563 771 aa16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 GPNMBQ14956 572 aa16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 TRIP10Q15642 601 aa16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 LPCAT4Q643R3 524 aa16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 GK5Q6ZS86 529 aa16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 RAB44Q7Z6P3 723 aaPredicted RBP16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 TMEM173Q86WV6 379 aaPredicted RBP16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 FBXO22Q8NEZ5 403 aa16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 OR52K2Q8NGK3 314 aa16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 PTERQ96BW5 349 aa16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 CEP295NLQ96MC4 621 aa16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 ZNF512Q96ME7 567 aaPredicted RBP16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 NPAS2Q99743 824 aa16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 MRPL1Q9BYD6 325 aaKnown RBP16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 UTP6Q9NYH9 597 aaKnown RBP16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 PSMD13Q9UNM6 376 aa16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 GPC4O75487 556 aa16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 LINGO3P0C6S8 592 aa16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 XRCC1P18887 633 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 PEX2P28328 305 aa16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 STC1P52823 247 aa16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 PKNOX1P55347 436 aa16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 HERVK_113P63132 956 aa16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 STX5Q13190 355 aa16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 PDAP1Q13442 181 aaKnown RBP16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 TYSND1Q2T9J0 566 aa16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 RYBPQ8N488 228 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 OVCA2Q8WZ82 227 aa16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 USP13Q92995 863 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 EXT2Q93063 718 aa16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 TMA16Q96EY4 203 aaKnown RBP16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 PSKH2Q96QS6 385 aa16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 AARSD1Q9BTE6 412 aaKnown RBP16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 ERVK-6Q9BXR3 956 aa16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 HMX1Q9NP08 348 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 INTS10Q9NVR2 710 aaKnown RBP16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 NLE1Q9NVX2 485 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 C6orf203Q9P0P8 240 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 PHF24Q9UPV7 400 aa16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 MTF2Q9Y483 593 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-217ENST00000592741 KDELR3O43731 214 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 ZNF37AP17032 561 aaPredicted RBP16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 PAX7P23759 505 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 KCNC1P48547 511 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 CEACAM7Q14002 265 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 FASTKQ14296 549 aaKnown RBP16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 LRRC36Q1X8D7 754 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 UNC50Q53HI1 259 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 ZFP1Q6P2D0 407 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 SH3RF2Q8TEC5 729 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 PLD4Q96BZ4 506 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 CDKN2AIPNLQ96HQ2 116 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 ASB2Q96Q27 587 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 ACTL7AQ9Y615 435 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 CHD5Q8TDI0 1954 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 H3BNC9 293 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 PSMD12O00232 456 aaPredicted RBP16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 UBFD1O14562 309 aaKnown RBP16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 INSIG1O15503 277 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 CLDN11O75508 207 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 RHOCP08134 193 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 TUFMP49411 452 aaKnown RBP16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 ZNF140P52738 457 aaPredicted RBP16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 TIAL1Q01085 375 aaKnown RBP eCLIP16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 SFT2D3Q587I9 215 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 HECTD3Q5T447 861 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 AFTPHQ6ULP2 937 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 DENND1CQ8IV53 801 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 PQLC1Q8N2U9 271 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 PTGR2Q8N8N7 351 aaPredicted RBP16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 BCL7CQ8WUZ0 217 aaPredicted RBP16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 RMDN1Q96DB5 314 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 EBF3Q9H4W6 596 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 SCUBE2Q9NQ36 999 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 SUFUQ9UMX1 484 aa16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 ARIH1Q9Y4X5 557 aaPredicted RBP16.57■□□□□ 0.24
PRKCSH-217ENST00000592741 PEX1O43933 1283 aa16.56■□□□□ 0.24
PRKCSH-217ENST00000592741 GJB5O95377 273 aa16.56■□□□□ 0.24
PRKCSH-217ENST00000592741 UBTFL6P0CB48 400 aaPredicted RBP16.56■□□□□ 0.24
PRKCSH-217ENST00000592741 DPP6P42658 865 aa16.56■□□□□ 0.24
PRKCSH-217ENST00000592741 SCNN1BP51168 640 aa16.56■□□□□ 0.24
PRKCSH-217ENST00000592741 RPS24P62847 133 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-217ENST00000592741 MMEL1Q495T6 779 aa16.56■□□□□ 0.24
PRKCSH-217ENST00000592741 CLEC6AQ6EIG7 209 aa16.56■□□□□ 0.24
PRKCSH-217ENST00000592741 KLHDC10Q6PID8 442 aa16.56■□□□□ 0.24
PRKCSH-217ENST00000592741 FAM43BQ6ZT52 329 aaPredicted RBP16.56■□□□□ 0.24
PRKCSH-217ENST00000592741 GLT6D1Q7Z4J2 308 aa16.56■□□□□ 0.24
PRKCSH-217ENST00000592741 LRRC43Q8N309 656 aa16.56■□□□□ 0.24
PRKCSH-217ENST00000592741 RHEBL1Q8TAI7 183 aa16.56■□□□□ 0.24
PRKCSH-217ENST00000592741 DLG3Q92796 817 aa16.56■□□□□ 0.24
PRKCSH-217ENST00000592741 PRICKLE1Q96MT3 831 aaPredicted RBP16.56■□□□□ 0.24
PRKCSH-217ENST00000592741 TFB2MQ9H5Q4 396 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-217ENST00000592741 MRPL40Q9NQ50 206 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-217ENST00000592741 POLR3BQ9NW08 1133 aaPredicted RBP16.56■□□□□ 0.24
PRKCSH-217ENST00000592741 MTRRQ9UBK8 725 aa16.56■□□□□ 0.24
PRKCSH-217ENST00000592741 ANKRD36A6QL64 1941 aa16.56■□□□□ 0.24
PRKCSH-217ENST00000592741 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 UBA6A0AVT1 1052 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms