RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 BPIFA1Q9NP55 256 aa11.4□□□□□ -0.58
TUBD1-211ENST00000591548 SSU72Q9NP77 194 aaKnown RBP11.4□□□□□ -0.58
TUBD1-211ENST00000591548 KCNK9Q9NPC2 374 aa11.4□□□□□ -0.58
TUBD1-211ENST00000591548 IL17CQ9P0M4 197 aa11.4□□□□□ -0.58
TUBD1-211ENST00000591548 THAP10Q9P2Z0 257 aaPredicted RBP11.4□□□□□ -0.58
TUBD1-211ENST00000591548 FBXO5Q9UKT4 447 aa11.4□□□□□ -0.58
TUBD1-211ENST00000591548 MTO1Q9Y2Z2 717 aaKnown RBP11.4□□□□□ -0.58
TUBD1-211ENST00000591548 C1orf232A0A0U1RR37 186 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 EDDM13A0A1B0GTR0 161 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 A0A1W2PQ67 120 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 TSPAN11A1L157 253 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 A8MX80 341 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 STX7O15400 261 aaKnown RBP11.39□□□□□ -0.59
TUBD1-211ENST00000591548 PRPF4O43172 522 aaKnown RBP eCLIP11.39□□□□□ -0.59
TUBD1-211ENST00000591548 HAUS5O94927 633 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 CLDN7O95471 211 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 APODP05090 189 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 MDH1P40925 334 aaKnown RBP11.39□□□□□ -0.59
TUBD1-211ENST00000591548 DNAJC3Q13217 504 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 SEMA3AQ14563 771 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 PREPLQ4J6C6 727 aaPredicted RBP11.39□□□□□ -0.59
TUBD1-211ENST00000591548 ZNF789Q5FWF6 425 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 EGFLAMQ63HQ2 1017 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 TTC19Q6DKK2 380 aaPredicted RBP11.39□□□□□ -0.59
TUBD1-211ENST00000591548 BRAT1Q6PJG6 821 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 TXNDC11Q6PKC3 985 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 CRTC1Q6UUV9 634 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 SERPINA13PQ6UXR4 307 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 KIAA0408Q6ZU52 694 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 LDB1Q86U70 411 aaPredicted RBP11.39□□□□□ -0.59
TUBD1-211ENST00000591548 TSPAN33Q86UF1 283 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 CILP2Q8IUL8 1156 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 STK40Q8N2I9 435 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 DCLK2Q8N568 766 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 GPR150Q8NGU9 434 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 OR4L1Q8NH43 312 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 CALML6Q8TD86 181 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 UCMAQ8WVF2 138 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 LRIG1Q96JA1 1093 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 VPS39Q96JC1 886 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 FAM129BQ96TA1 746 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 P2RY13Q9BPV8 354 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 PHF7Q9BWX1 381 aaPredicted RBP11.39□□□□□ -0.59
TUBD1-211ENST00000591548 RHOJQ9H4E5 214 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 ZFYVE1Q9HBF4 777 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 TRPV5Q9NQA5 729 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 FKBPLQ9UIM3 349 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 SARDHQ9UL12 918 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 STARD13Q9Y3M8 1113 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 COL4A2P08572 1712 aa11.39□□□□□ -0.59
TUBD1-211ENST00000591548 FAM47DPA6NHR8 397 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 SPECC1L-ADORA2AF8WAN1 911 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 H7C0S8 307 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 K7EQS6 105 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 TPP1O14773 563 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 CD3EAPO15446 510 aaKnown RBP11.38□□□□□ -0.59
TUBD1-211ENST00000591548 S1PR4O95977 384 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 PRSS56P0CW18 603 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 FOSL2P15408 326 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 TIMP2P16035 220 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 LHCGRP22888 699 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 CTHP32929 405 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 RPA3P35244 121 aaPredicted RBP11.38□□□□□ -0.59
TUBD1-211ENST00000591548 CCNFP41002 786 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 LEPRP48357 1165 aaKnown RBP11.38□□□□□ -0.59
TUBD1-211ENST00000591548 SLC18A1P54219 525 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 POLR2LP62875 67 aaKnown RBP11.38□□□□□ -0.59
TUBD1-211ENST00000591548 PEX6Q13608 980 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 ENPP2Q13822 863 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 SMAD2Q15796 467 aaKnown RBP11.38□□□□□ -0.59
TUBD1-211ENST00000591548 UGP2Q16851 508 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 ZNF805Q5CZA5 627 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 LRRC73Q5JTD7 316 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 CNSTQ6PJW8 725 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 TPRG1Q6ZUI0 275 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 USP45Q70EL2 814 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 LMNTD2Q8IXW0 634 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 ANKRD42Q8N9B4 389 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 DENND1AQ8TEH3 1009 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 HLA-CQ95604 372 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 ISL2Q96A47 359 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 ALKBH8Q96BT7 664 aaKnown RBP11.38□□□□□ -0.59
TUBD1-211ENST00000591548 SGSM3Q96HU1 749 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 SRPK1Q96SB4 655 aaKnown RBP11.38□□□□□ -0.59
TUBD1-211ENST00000591548 GPR22Q99680 433 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 OSBPL1AQ9BXW6 950 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 CAPS2Q9BXY5 557 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 CAB39LQ9H9S4 337 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 FBXO6Q9NRD1 293 aaPredicted RBP11.38□□□□□ -0.59
TUBD1-211ENST00000591548 CACNA2D2Q9NY47 1150 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 DKK3Q9UBP4 350 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 PPM1HQ9ULR3 514 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 SMG5Q9UPR3 1016 aaKnown RBP11.38□□□□□ -0.59
TUBD1-211ENST00000591548 PKP3Q9Y446 797 aa11.38□□□□□ -0.59
TUBD1-211ENST00000591548 ASGR2P07307 311 aa11.37□□□□□ -0.59
TUBD1-211ENST00000591548 CHRM1P11229 460 aaPredicted RBP11.37□□□□□ -0.59
TUBD1-211ENST00000591548 HNRNPLP14866 589 aaKnown RBP eCLIP11.37□□□□□ -0.599e-9■■■■■ 31.2
TUBD1-211ENST00000591548 MC4RP32245 332 aa11.37□□□□□ -0.59
TUBD1-211ENST00000591548 FOXN2P32314 431 aa11.37□□□□□ -0.59
TUBD1-211ENST00000591548 HADHAP40939 763 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms