RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 KELP23276 732 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 EPHB2P29323 1055 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 CYLC1P35663 651 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-226ENST00000591534 NSFP46459 744 aaKnown RBP9.51□□□□□ -0.89
BRCA1-226ENST00000591534 HK3P52790 923 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 AIF1P55008 147 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 NOMO3P69849 1222 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 CDR2Q01850 454 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 TNP2Q05952 138 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 C1orf61Q13536 156 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 TSNAXIP1Q2TAA8 658 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 PARP15Q460N3 678 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 CCDC14Q49A88 953 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 MANEALQ5VSG8 457 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 SLFN11Q7Z7L1 901 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 DNAAF5Q86Y56 855 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 HID1Q8IV36 788 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 RBFAQ8N0V3 343 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 FBXO39Q8N4B4 442 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 EMC1Q8N766 993 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 PAF1Q8N7H5 531 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 ZSCAN1Q8NBB4 408 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 FAM172AQ8WUF8 416 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 NTAN1Q96AB6 310 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 ZNF641Q96N77 438 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-226ENST00000591534 LRRC61Q9BV99 259 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 SELENOOQ9BVL4 669 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 CPEB1Q9BZB8 566 aaKnown RBP9.51□□□□□ -0.89
BRCA1-226ENST00000591534 NLRC4Q9NPP4 1024 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 FAM207AQ9NSI2 230 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-226ENST00000591534 AKAP7Q9P0M2 348 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-226ENST00000591534 ITM2BQ9Y287 266 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 HEMK1Q9Y5R4 338 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-226ENST00000591534 FLNBO75369 2602 aaKnown RBP9.5□□□□□ -0.89
BRCA1-226ENST00000591534 PDE2AO00408 941 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-226ENST00000591534 NTN3O00634 580 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-226ENST00000591534 FGF10O15520 208 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-226ENST00000591534 TEX33O43247 280 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 TMCC1O94876 653 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 TNFP01375 233 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 CALB1P05937 261 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 CHRNB2P17787 502 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 NFKBIAP25963 317 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 GKP32189 559 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 HTR7P34969 479 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 IGFALSP35858 605 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 PBX1P40424 430 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 JAM2P57087 298 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 POLR2FP61218 127 aaKnown RBP9.5□□□□□ -0.89
BRCA1-226ENST00000591534 POLR2LP62875 67 aaKnown RBP9.5□□□□□ -0.89
BRCA1-226ENST00000591534 PEX6Q13608 980 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 NFATC4Q14934 902 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 C15orf59Q2T9L4 293 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-226ENST00000591534 TMEM52BQ4KMG9 183 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 PERM1Q5SV97 790 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 ATXN7L2Q5T6C5 722 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-226ENST00000591534 TRNP1Q6NT89 227 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 BRAT1Q6PJG6 821 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 CRTC1Q6UUV9 634 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 PCSK4Q6UW60 755 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 ENPP7Q6UWV6 458 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 USP53Q70EK8 1073 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 RAB11FIP2Q7L804 512 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 JAMLQ86YT9 394 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 LRRC8AQ8IWT6 810 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 RTL3Q8N8U3 475 aaKnown RBP9.5□□□□□ -0.89
BRCA1-226ENST00000591534 TP53I13Q8NBR0 393 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-226ENST00000591534 SPC24Q8NBT2 197 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 TTC9Q92623 222 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 CENPIQ92674 756 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-226ENST00000591534 ABHD17AQ96GS6 310 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 NAP1L5Q96NT1 182 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-226ENST00000591534 TUBGCP5Q96RT8 1024 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 BAG1Q99933 345 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-226ENST00000591534 WRAP53Q9BUR4 548 aaKnown RBP9.5□□□□□ -0.89
BRCA1-226ENST00000591534 GSX2Q9BZM3 304 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 CLMPQ9H6B4 373 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 EPB41L5Q9HCM4 733 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 ADAM22Q9P0K1 906 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 KLQ9UEF7 1012 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 ATXN7L1Q9ULK2 861 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-226ENST00000591534 GPR34Q9UPC5 381 aa9.5□□□□□ -0.89
BRCA1-226ENST00000591534 ASH1LQ9NR48 2969 aaKnown RBP9.5□□□□□ -0.89
BRCA1-226ENST00000591534 PTPRQQ9UMZ3 2332 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 CFAP69A5D8W1 941 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 C2CD4BA6NLJ0 364 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 CACNB4O00305 520 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-226ENST00000591534 EREGO14944 169 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 EFSO43281 561 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 MFAP3LO75121 409 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 RECKO95980 971 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 CYP1A1P04798 512 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-226ENST00000591534 ITGB2P05107 769 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 FAM157BP0CG42 384 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 PNLIPP16233 465 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 FERP16591 822 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 GPD1P21695 349 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 HNRNPH3P31942 346 aaKnown RBP9.49□□□□□ -0.89
BRCA1-226ENST00000591534 CCKBRP32239 447 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 STAT1P42224 750 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms