RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 KDM1BQ8NB78 822 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 CHST14Q8NCH0 376 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 OR2AP1Q8NGE2 309 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 OR2A12Q8NGT7 310 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 PIP4K2CQ8TBX8 421 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 FRS2Q8WU20 508 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 EDARADDQ8WWZ3 215 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 CASKIN2Q8WXE0 1202 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 SIPA1Q96FS4 1042 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 ZNF419Q96HQ0 510 aaPredicted RBP6.47□□□□□ -1.37
VPS4B-205ENST00000591383 MS4A14Q96JA4 679 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 MRGPRX1Q96LB2 322 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 CCDC74BQ96LY2 380 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 ZNF599Q96NL3 588 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 CLUHP3Q96NS8 147 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 AGAP3Q96P47 875 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 FANCD2OSQ96PS1 177 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 OSBPL9Q96SU4 736 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 POLR1EQ9GZS1 481 aaKnown RBP6.47□□□□□ -1.37
VPS4B-205ENST00000591383 MKRN2Q9H000 416 aaKnown RBP6.47□□□□□ -1.37
VPS4B-205ENST00000591383 RSPH9Q9H1X1 276 aaPredicted RBP6.47□□□□□ -1.37
VPS4B-205ENST00000591383 CAAP1Q9H8G2 361 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 C10orf88Q9H8K7 445 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 CD93Q9NPY3 652 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 KLHL8Q9P2G9 620 aaPredicted RBP6.47□□□□□ -1.37
VPS4B-205ENST00000591383 HECAQ9UBI9 543 aaPredicted RBP6.47□□□□□ -1.37
VPS4B-205ENST00000591383 SUN2Q9UH99 717 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 EVLQ9UI08 416 aaPredicted RBP6.47□□□□□ -1.37
VPS4B-205ENST00000591383 SNX12Q9UMY4 172 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 INVSQ9Y283 1065 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 FRYLO94915 3013 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 NUMA1Q14980 2115 aa6.46□□□□□ -1.37
VPS4B-205ENST00000591383 TRBV23-1A0A0A0MS06 115 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 GOLGA6L10A0A0M3HER8 536 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 TARSL2A2RTX5 802 aaKnown RBP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 FAM47DPA6NHR8 397 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 HACD1B0YJ81 288 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 H0Y858 1186 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 ZNF185O15231 689 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 MATN3O15232 486 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 ALOX15BO15296 676 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 INSIG1O15503 277 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 KCNN4O15554 427 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 LEFTY1O75610 366 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 PAPSS2O95340 614 aaPredicted RBP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 JCHAINP01591 159 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 SLC4A1P02730 911 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 PRNPP04156 253 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 CTSLP07711 333 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 SP9P0CG40 484 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 RBP3P10745 1247 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 TDGF1P13385 188 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 CCNB1P14635 433 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 TCP1P17987 556 aaKnown RBP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 XPAP23025 273 aaPredicted RBP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 CCNCP24863 283 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 SERPINA4P29622 427 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 CASQ1P31415 396 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 CHRNA3P32297 505 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 HSPA9P38646 679 aaKnown RBP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 SCNN1BP51168 640 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 RENBPP51606 427 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 AP1S1P61966 158 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 RPS14P62263 151 aaKnown RBP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 IFI35P80217 286 aaPredicted RBP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 DSC2Q02487 901 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 SRSF11Q05519 484 aaKnown RBP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 RAD51Q06609 339 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 SRSF5Q13243 272 aaKnown RBP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 KLF1Q13351 362 aaPredicted RBP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 SLBPQ14493 270 aaKnown RBP eCLIP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 CYTH1Q15438 398 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 INO80DQ53TQ3 878 aaPredicted RBP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 FAM46CQ5VWP2 391 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 ZC3H14Q6PJT7 736 aaKnown RBP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 PRR23BQ6ZRT6 265 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 ARHGEF18Q6ZSZ5 1173 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 CEP68Q76N32 757 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 PARS2Q7L3T8 475 aaKnown RBP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 ARMCX6Q7L4S7 300 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 WDR5BQ86VZ2 330 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 LRRC49Q8IUZ0 686 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 MAML2Q8IZL2 1156 aaPredicted RBP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 GALNT6Q8NCL4 622 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 PRSS33Q8NF86 280 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 BAHD1Q8TBE0 780 aaPredicted RBP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 UBASH3BQ8TF42 649 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 COG1Q8WTW3 980 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 PDCD6IPQ8WUM4 868 aaKnown RBP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 MAIP1Q8WWC4 291 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 C1orf54Q8WWF1 131 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 HTR3CQ8WXA8 447 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 RLN3Q8WXF3 142 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 SNX19Q92543 992 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 PTPRN2Q92932 1015 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 ISG20Q96AZ6 181 aaKnown RBP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 PPP1R16AQ96I34 528 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 PBKQ96KB5 322 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 PSKH2Q96QS6 385 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 NAP1L3Q99457 506 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms