RNA–Protein interactions for RNA: ENST00000591247.5

LSM12-204, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,484 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-204ENST00000591247 PPM1HQ9ULR3 514 aa17.06■□□□□ 0.32
LSM12-204ENST00000591247 LAMA2P24043 3122 aaKnown RBP17.06■□□□□ 0.32
LSM12-204ENST00000591247 TMEM233B4DJY2 109 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 KDELR3O43731 214 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 FKBP6O75344 327 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 LTA4HP09960 611 aaKnown RBP17.05■□□□□ 0.32
LSM12-204ENST00000591247 PABPC4LP0CB38 370 aaKnown RBP17.05■□□□□ 0.32
LSM12-204ENST00000591247 ATP5F1P24539 256 aaPredicted RBP17.05■□□□□ 0.32
LSM12-204ENST00000591247 ERFP50548 548 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 OXCT1P55809 520 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 NSUN2Q08J23 767 aaKnown RBP eCLIP17.05■□□□□ 0.32
LSM12-204ENST00000591247 KLF10Q13118 480 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 PLD1Q13393 1074 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 BTG3Q14201 252 aaPredicted RBP17.05■□□□□ 0.32
LSM12-204ENST00000591247 LSM12Q3MHD2 195 aaKnown RBP17.05■□□□□ 0.32
LSM12-204ENST00000591247 ZNF549Q6P9A3 640 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 ADGRG6Q86SQ4 1221 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 KDM1BQ8NB78 822 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 GABPB2Q8TAK5 448 aaPredicted RBP17.05■□□□□ 0.32
LSM12-204ENST00000591247 BRSK1Q8TDC3 778 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 PLD4Q96BZ4 506 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 SMIM14Q96QK8 99 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 EBF3Q9H4W6 596 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 ZDHHC7Q9NXF8 308 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 TRPM5Q9NZQ8 1165 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 UBA2Q9UBT2 640 aaPredicted RBP17.05■□□□□ 0.32
LSM12-204ENST00000591247 SEPT3Q9UH03 358 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 CLDN11O75508 207 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 PENKP01210 267 aaPredicted RBP17.05■□□□□ 0.32
LSM12-204ENST00000591247 PRSS56P0CW18 603 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 TIAL1Q01085 375 aaKnown RBP eCLIP17.05■□□□□ 0.32
LSM12-204ENST00000591247 PFKPQ01813 784 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 TLE2Q04725 743 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 TRIM60Q495X7 471 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 METTL21CQ5VZV1 264 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 SLC39A5Q6ZMH5 540 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 FRMD7Q6ZUT3 714 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 C16orf59Q7L2K0 433 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 CMTM5Q96DZ9 223 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 MYRFLQ96LU7 910 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 CYP4F12Q9HCS2 524 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 YIPF1Q9Y548 306 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 SPO11Q9Y5K1 396 aa17.05■□□□□ 0.32
LSM12-204ENST00000591247 CD3EAPO15446 510 aaKnown RBP17.04■□□□□ 0.32
LSM12-204ENST00000591247 NPHS1O60500 1241 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 HNRNPLP14866 589 aaKnown RBP eCLIP17.04■□□□□ 0.32
LSM12-204ENST00000591247 KCNC1P48547 511 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 SCNN1BP51168 640 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 DNAJB13P59910 316 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 AGAP9Q5VTM2 703 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 AAGABQ6PD74 315 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 RPS27LQ71UM5 84 aaKnown RBP17.04■□□□□ 0.32
LSM12-204ENST00000591247 PDCD6IPQ8WUM4 868 aaKnown RBP17.04■□□□□ 0.32
LSM12-204ENST00000591247 TSPAN17Q96FV3 270 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 CINPQ9BW66 212 aaPredicted RBP17.04■□□□□ 0.32
LSM12-204ENST00000591247 KLF16Q9BXK1 252 aaPredicted RBP17.04■□□□□ 0.32
LSM12-204ENST00000591247 RNF208Q9H0X6 261 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 LMCD1Q9NZU5 365 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 A8MT66 165 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 SCAMP3O14828 347 aaKnown RBP17.04■□□□□ 0.32
LSM12-204ENST00000591247 RPP40O75818 363 aaKnown RBP17.04■□□□□ 0.32
LSM12-204ENST00000591247 NDST3O95803 873 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 GLP2RO95838 553 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 SOD2P04179 222 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 RHOCP08134 193 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 PIM1P11309 404 aaPredicted RBP17.04■□□□□ 0.32
LSM12-204ENST00000591247 COX4I1P13073 169 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 CR2P20023 1033 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 MNX1P50219 401 aaPredicted RBP17.04■□□□□ 0.32
LSM12-204ENST00000591247 KPNA2P52292 529 aaKnown RBP17.04■□□□□ 0.32
LSM12-204ENST00000591247 PLK1P53350 603 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 CYTH1Q15438 398 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 FSCBQ5H9T9 825 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 GPR158Q5T848 1215 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 PDSS2Q86YH6 399 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 LENG8Q96PV6 779 aaPredicted RBP17.04■□□□□ 0.32
LSM12-204ENST00000591247 TMCO1Q9UM00 188 aa17.04■□□□□ 0.32
LSM12-204ENST00000591247 G3BP2Q9UN86 482 aaKnown RBP17.04■□□□□ 0.32
LSM12-204ENST00000591247 ANAPC1Q9H1A4 1944 aa17.03■□□□□ 0.32
LSM12-204ENST00000591247 ILVBLA1L0T0 632 aa17.03■□□□□ 0.32
LSM12-204ENST00000591247 ETS2P15036 469 aa17.03■□□□□ 0.32
LSM12-204ENST00000591247 HK2P52789 917 aa17.03■□□□□ 0.32
LSM12-204ENST00000591247 ADGRF1Q5T601 910 aa17.03■□□□□ 0.32
LSM12-204ENST00000591247 TMEM198Q66K66 360 aa17.03■□□□□ 0.32
LSM12-204ENST00000591247 PIWIL4Q7Z3Z4 852 aaKnown RBP17.03■□□□□ 0.32
LSM12-204ENST00000591247 NAT14Q8WUY8 206 aa17.03■□□□□ 0.32
LSM12-204ENST00000591247 RETREG1Q9H6L5 497 aa17.03■□□□□ 0.32
LSM12-204ENST00000591247 SMPD4Q9NXE4 827 aa17.03■□□□□ 0.32
LSM12-204ENST00000591247 NCKIPSDQ9NZQ3 722 aa17.03■□□□□ 0.32
LSM12-204ENST00000591247 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.03■□□□□ 0.32
LSM12-204ENST00000591247 CBX4O00257 560 aa17.03■□□□□ 0.32
LSM12-204ENST00000591247 INSIG1O15503 277 aa17.03■□□□□ 0.32
LSM12-204ENST00000591247 SORBS2O94875 1100 aaKnown RBP17.03■□□□□ 0.32
LSM12-204ENST00000591247 PRLP01236 227 aa17.03■□□□□ 0.32
LSM12-204ENST00000591247 SLC4A1P02730 911 aa17.03■□□□□ 0.32
LSM12-204ENST00000591247 CCL5P13501 91 aa17.03■□□□□ 0.32
LSM12-204ENST00000591247 ITGAXP20702 1163 aa17.03■□□□□ 0.32
LSM12-204ENST00000591247 SERPINB5P36952 375 aa17.03■□□□□ 0.32
LSM12-204ENST00000591247 ASPHQ12797 758 aa17.03■□□□□ 0.32
LSM12-204ENST00000591247 ZNF177Q13360 481 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms