RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 FICDQ9BVA6 458 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 FSD1LQ9BXM9 530 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 ADGRE3Q9BY15 652 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 PHACTR1Q9C0D0 580 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 RSPH9Q9H1X1 276 aaPredicted RBP16.67■□□□□ 0.26
GCDH-213ENST00000590627 DKK3Q9UBP4 350 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 MSRB2Q9Y3D2 182 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 SPAARA0A1B0GVQ0 90 aa16.66■□□□□ 0.26
GCDH-213ENST00000590627 HYAL3O43820 417 aaPredicted RBP16.66■□□□□ 0.26
GCDH-213ENST00000590627 PIGNO95427 931 aa16.66■□□□□ 0.26
GCDH-213ENST00000590627 ATXN1LP0C7T5 689 aaKnown RBP16.66■□□□□ 0.26
GCDH-213ENST00000590627 CD59P13987 128 aa16.66■□□□□ 0.26
GCDH-213ENST00000590627 GRIA1P42261 906 aa16.66■□□□□ 0.26
GCDH-213ENST00000590627 MAGEA3P43357 314 aa16.66■□□□□ 0.26
GCDH-213ENST00000590627 VSNL1P62760 191 aa16.66■□□□□ 0.26
GCDH-213ENST00000590627 SLC1A5Q15758 541 aa16.66■□□□□ 0.26
GCDH-213ENST00000590627 PCSK7Q16549 785 aa16.66■□□□□ 0.26
GCDH-213ENST00000590627 ZNF805Q5CZA5 627 aa16.66■□□□□ 0.26
GCDH-213ENST00000590627 ARSIQ5FYB1 569 aa16.66■□□□□ 0.26
GCDH-213ENST00000590627 ARMC12Q5T9G4 340 aa16.66■□□□□ 0.26
GCDH-213ENST00000590627 OR2T3Q8NH03 318 aa16.66■□□□□ 0.26
GCDH-213ENST00000590627 PIH1D2Q8WWB5 315 aa16.66■□□□□ 0.26
GCDH-213ENST00000590627 SERPINB12Q96P63 405 aa16.66■□□□□ 0.26
GCDH-213ENST00000590627 ZDHHC5Q9C0B5 715 aa16.66■□□□□ 0.26
GCDH-213ENST00000590627 TSPYL1Q9H0U9 437 aa16.66■□□□□ 0.26
GCDH-213ENST00000590627 SLC6A17Q9H1V8 727 aa16.66■□□□□ 0.26
GCDH-213ENST00000590627 NEUROG2Q9H2A3 272 aa16.66■□□□□ 0.26
GCDH-213ENST00000590627 CD93Q9NPY3 652 aa16.66■□□□□ 0.26
GCDH-213ENST00000590627 ITM2CQ9NQX7 267 aa16.66■□□□□ 0.26
GCDH-213ENST00000590627 WSB2Q9NYS7 404 aaPredicted RBP16.66■□□□□ 0.26
GCDH-213ENST00000590627 USP36Q9P275 1121 aaKnown RBP16.66■□□□□ 0.26
GCDH-213ENST00000590627 CHKBQ9Y259 395 aa16.66■□□□□ 0.26
GCDH-213ENST00000590627 CKAP5Q14008 2032 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 SPEGQ15772 3267 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 FAM221BA6H8Z2 402 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 USP12O75317 370 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 FGF1P05230 155 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 UGT2B4P06133 528 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 PDHA1P08559 390 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 TNNT3P45378 269 aaPredicted RBP16.65■□□□□ 0.26
GCDH-213ENST00000590627 CDH17Q12864 832 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 OLIG2Q13516 323 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 HLTFQ14527 1009 aaKnown RBP eCLIP16.65■□□□□ 0.26
GCDH-213ENST00000590627 ZNF423Q2M1K9 1284 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 SIRPB2Q5JXA9 342 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 ARMC3Q5W041 872 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 BRAT1Q6PJG6 821 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 CADM4Q8NFZ8 388 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 OR52K1Q8NGK4 314 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 PIP4K2CQ8TBX8 421 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 GRIN3AQ8TCU5 1115 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 DNASE2BQ8WZ79 361 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 ERLEC1Q96DZ1 483 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 MKRN2Q9H000 416 aaKnown RBP16.65■□□□□ 0.26
GCDH-213ENST00000590627 MTRF1LQ9UGC7 380 aaKnown RBP16.65■□□□□ 0.26
GCDH-213ENST00000590627 NFU1Q9UMS0 254 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 PPIL1Q9Y3C6 166 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 PCDHB9Q9Y5E1 797 aa16.65■□□□□ 0.26
GCDH-213ENST00000590627 PKD1L2Q7Z442 2459 aa16.64■□□□□ 0.26
GCDH-213ENST00000590627 ANKRD66B4E2M5 251 aa16.64■□□□□ 0.25
GCDH-213ENST00000590627 E7ESA3 106 aa16.64■□□□□ 0.25
GCDH-213ENST00000590627 C1QTNF3-AMACRE9PGA6 284 aa16.64■□□□□ 0.25
GCDH-213ENST00000590627 GOLGA8MH3BSY2 632 aa16.64■□□□□ 0.25
GCDH-213ENST00000590627 EIF3HO15372 352 aaKnown RBP eCLIP16.64■□□□□ 0.25
GCDH-213ENST00000590627 RNASEH1O60930 286 aaKnown RBP16.64■□□□□ 0.25
GCDH-213ENST00000590627 ITGB7P26010 798 aa16.64■□□□□ 0.25
GCDH-213ENST00000590627 OXTRP30559 389 aa16.64■□□□□ 0.25
GCDH-213ENST00000590627 CHRNA4P43681 627 aa16.64■□□□□ 0.25
GCDH-213ENST00000590627 NPY2RP49146 381 aa16.64■□□□□ 0.25
GCDH-213ENST00000590627 COPAP53621 1224 aa16.64■□□□□ 0.25
GCDH-213ENST00000590627 ARL4CP56559 192 aa16.64■□□□□ 0.25
GCDH-213ENST00000590627 POLR2LP62875 67 aaKnown RBP16.64■□□□□ 0.25
GCDH-213ENST00000590627 MSLNQ13421 630 aaPredicted RBP16.64■□□□□ 0.25
GCDH-213ENST00000590627 HIF1AQ16665 826 aa16.64■□□□□ 0.25
GCDH-213ENST00000590627 FAM46CQ5VWP2 391 aa16.64■□□□□ 0.25
GCDH-213ENST00000590627 CEP128Q6ZU80 1094 aa16.64■□□□□ 0.25
GCDH-213ENST00000590627 KDELC2Q7Z4H8 507 aa16.64■□□□□ 0.25
GCDH-213ENST00000590627 PDIK1LQ8N165 341 aa16.64■□□□□ 0.25
GCDH-213ENST00000590627 TOE1Q96GM8 510 aaKnown RBP16.64■□□□□ 0.25
GCDH-213ENST00000590627 KLHL32Q96NJ5 620 aa16.64■□□□□ 0.25
GCDH-213ENST00000590627 FMO2Q99518 471 aa16.64■□□□□ 0.25
GCDH-213ENST00000590627 APOL2Q9BQE5 337 aa16.64■□□□□ 0.25
GCDH-213ENST00000590627 SARDHQ9UL12 918 aa16.64■□□□□ 0.25
GCDH-213ENST00000590627 PHTF1Q9UMS5 762 aa16.64■□□□□ 0.25
GCDH-213ENST00000590627 A0A1B0GTW7 788 aa16.63■□□□□ 0.25
GCDH-213ENST00000590627 ADH1BP00325 375 aa16.63■□□□□ 0.25
GCDH-213ENST00000590627 IGLV3-19P01714 112 aa16.63■□□□□ 0.25
GCDH-213ENST00000590627 MYBL2P10244 700 aa16.63■□□□□ 0.25
GCDH-213ENST00000590627 GRIA4P48058 902 aa16.63■□□□□ 0.25
GCDH-213ENST00000590627 FAM193AP78312 1265 aa16.63■□□□□ 0.25
GCDH-213ENST00000590627 ZBTB16Q05516 673 aa16.63■□□□□ 0.25
GCDH-213ENST00000590627 QPCTQ16769 361 aa16.63■□□□□ 0.25
GCDH-213ENST00000590627 DNAJC21Q5F1R6 531 aaKnown RBP16.63■□□□□ 0.25
GCDH-213ENST00000590627 FNBP1LQ5T0N5 605 aa16.63■□□□□ 0.25
GCDH-213ENST00000590627 ZNF776Q68DI1 518 aaPredicted RBP16.63■□□□□ 0.25
GCDH-213ENST00000590627 ZSWIM9Q86XI8 627 aa16.63■□□□□ 0.25
GCDH-213ENST00000590627 TMPRSS6Q8IU80 811 aa16.63■□□□□ 0.25
GCDH-213ENST00000590627 RELL1Q8IUW5 271 aa16.63■□□□□ 0.25
GCDH-213ENST00000590627 MMAAQ8IVH4 418 aaKnown RBP16.63■□□□□ 0.25
GCDH-213ENST00000590627 SLC25A41Q8N5S1 370 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms