RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 CYP4F12Q9HCS2 524 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 ADAM22Q9P0K1 906 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 ARHGEF17Q96PE2 2063 aaPredicted RBP17.37■□□□□ 0.37
RETREG3-210ENST00000590541 RHPN2P1A8MT19 583 aa17.37■□□□□ 0.37
RETREG3-210ENST00000590541 RECQL5O94762 991 aaPredicted RBP17.37■□□□□ 0.37
RETREG3-210ENST00000590541 FGF1P05230 155 aa17.37■□□□□ 0.37
RETREG3-210ENST00000590541 HOXC4P09017 264 aaPredicted RBP17.37■□□□□ 0.37
RETREG3-210ENST00000590541 KRT3P12035 628 aa17.37■□□□□ 0.37
RETREG3-210ENST00000590541 TRIM23P36406 574 aa17.37■□□□□ 0.37
RETREG3-210ENST00000590541 ZNF165P49910 485 aa17.37■□□□□ 0.37
RETREG3-210ENST00000590541 RALGDSQ12967 914 aa17.37■□□□□ 0.37
RETREG3-210ENST00000590541 TRA2AQ13595 282 aaKnown RBP eCLIP17.37■□□□□ 0.37
RETREG3-210ENST00000590541 ERAP2Q6P179 960 aa17.37■□□□□ 0.37
RETREG3-210ENST00000590541 PELI3Q8N2H9 469 aa17.37■□□□□ 0.37
RETREG3-210ENST00000590541 C3orf20Q8ND61 904 aa17.37■□□□□ 0.37
RETREG3-210ENST00000590541 SLC30A5Q8TAD4 765 aa17.37■□□□□ 0.37
RETREG3-210ENST00000590541 RXFP2Q8WXD0 754 aa17.37■□□□□ 0.37
RETREG3-210ENST00000590541 AGPAT1Q99943 283 aa17.37■□□□□ 0.37
RETREG3-210ENST00000590541 NCAPGQ9BPX3 1015 aa17.37■□□□□ 0.37
RETREG3-210ENST00000590541 RTN4Q9NQC3 1192 aaKnown RBP17.37■□□□□ 0.37
RETREG3-210ENST00000590541 ATP8A1Q9Y2Q0 1164 aa17.37■□□□□ 0.37
RETREG3-210ENST00000590541 UTP20O75691 2785 aaKnown RBP17.37■□□□□ 0.37
RETREG3-210ENST00000590541 PRSS38A1L453 326 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 ANKRD62A6NC57 917 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 C2CD4BA6NLJ0 364 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 SIGLEC16A6NMB1 481 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 BUB1BO60566 1050 aaPredicted RBP17.36■□□□□ 0.37
RETREG3-210ENST00000590541 PLEKP08567 350 aaPredicted RBP17.36■□□□□ 0.37
RETREG3-210ENST00000590541 ATP1A3P13637 1013 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 CCNB1P14635 433 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 DESP17661 470 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 GM2AP17900 193 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 KELP23276 732 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 CD97P48960 835 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 PTP4A2Q12974 167 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 CCDC14Q49A88 953 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 CAVIN1Q6NZI2 390 aaKnown RBP17.36■□□□□ 0.37
RETREG3-210ENST00000590541 DNAAF5Q86Y56 855 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 CCDC185Q8N715 623 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 AGBL5Q8NDL9 886 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 ZDHHC1Q8WTX9 485 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 CENPIQ92674 756 aaPredicted RBP17.36■□□□□ 0.37
RETREG3-210ENST00000590541 PCDHB18PQ96TA0 734 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 SELENOOQ9BVL4 669 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 SPRY4Q9C004 299 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 LRRC4CQ9HCJ2 640 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 OCIAD1Q9NX40 245 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 SLC39A1Q9NY26 324 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 MOSPD1Q9UJG1 213 aa17.36■□□□□ 0.37
RETREG3-210ENST00000590541 USP9XQ93008 2570 aaPredicted RBP17.35■□□□□ 0.37
RETREG3-210ENST00000590541 CFAP69A5D8W1 941 aa17.35■□□□□ 0.37
RETREG3-210ENST00000590541 CAPN5O15484 640 aaPredicted RBP17.35■□□□□ 0.37
RETREG3-210ENST00000590541 ECEL1O95672 775 aa17.35■□□□□ 0.37
RETREG3-210ENST00000590541 PRKAR1AP10644 381 aa17.35■□□□□ 0.37
RETREG3-210ENST00000590541 THRAP10827 490 aa17.35■□□□□ 0.37
RETREG3-210ENST00000590541 PTMSP20962 102 aa17.35■□□□□ 0.37
RETREG3-210ENST00000590541 MPSTP25325 297 aa17.35■□□□□ 0.37
RETREG3-210ENST00000590541 CSF2RBP32927 897 aa17.35■□□□□ 0.37
RETREG3-210ENST00000590541 CDC20Q12834 499 aa17.35■□□□□ 0.37
RETREG3-210ENST00000590541 NKAIN2Q5VXU1 208 aa17.35■□□□□ 0.37
RETREG3-210ENST00000590541 BRAT1Q6PJG6 821 aa17.35■□□□□ 0.37
RETREG3-210ENST00000590541 LIPIQ6XZB0 460 aa17.35■□□□□ 0.37
RETREG3-210ENST00000590541 CAMK1DQ8IU85 385 aa17.35■□□□□ 0.37
RETREG3-210ENST00000590541 RTL3Q8N8U3 475 aaKnown RBP17.35■□□□□ 0.37
RETREG3-210ENST00000590541 CCDC112Q8NEF3 446 aa17.35■□□□□ 0.37
RETREG3-210ENST00000590541 OR4D9Q8NGE8 314 aa17.35■□□□□ 0.37
RETREG3-210ENST00000590541 PATE1Q8WXA2 126 aa17.35■□□□□ 0.37
RETREG3-210ENST00000590541 ZNF641Q96N77 438 aaPredicted RBP17.35■□□□□ 0.37
RETREG3-210ENST00000590541 ASPSCR1Q9BZE9 553 aa17.35■□□□□ 0.37
RETREG3-210ENST00000590541 SEPT11Q9NVA2 429 aaKnown RBP17.35■□□□□ 0.37
RETREG3-210ENST00000590541 TMEM9Q9P0T7 183 aa17.35■□□□□ 0.37
RETREG3-210ENST00000590541 PILRAQ9UKJ1 303 aa17.35■□□□□ 0.37
RETREG3-210ENST00000590541 LOC101059948A0A1B0GTJ6 334 aa17.34■□□□□ 0.37
RETREG3-210ENST00000590541 RASA4BC9J798 803 aa17.34■□□□□ 0.37
RETREG3-210ENST00000590541 MTSS1O43312 755 aa17.34■□□□□ 0.37
RETREG3-210ENST00000590541 RASA4O43374 803 aa17.34■□□□□ 0.37
RETREG3-210ENST00000590541 FUCA1P04066 466 aa17.34■□□□□ 0.37
RETREG3-210ENST00000590541 GPD1P21695 349 aa17.34■□□□□ 0.37
RETREG3-210ENST00000590541 OAS2P29728 719 aaKnown RBP17.34■□□□□ 0.37
RETREG3-210ENST00000590541 CSTF2P33240 577 aaKnown RBP eCLIP17.34■□□□□ 0.37
RETREG3-210ENST00000590541 GPR3P46089 330 aa17.34■□□□□ 0.37
RETREG3-210ENST00000590541 AIF1P55008 147 aa17.34■□□□□ 0.37
RETREG3-210ENST00000590541 SQSTM1Q13501 440 aa17.34■□□□□ 0.37
RETREG3-210ENST00000590541 GRM3Q14832 879 aa17.34■□□□□ 0.37
RETREG3-210ENST00000590541 TSR1Q2NL82 804 aaKnown RBP17.34■□□□□ 0.37
RETREG3-210ENST00000590541 ANKS6Q68DC2 871 aa17.34■□□□□ 0.37
RETREG3-210ENST00000590541 MON1BQ7L1V2 547 aa17.34■□□□□ 0.37
RETREG3-210ENST00000590541 PYROXD2Q8N2H3 581 aa17.34■□□□□ 0.37
RETREG3-210ENST00000590541 BMPERQ8N8U9 685 aa17.34■□□□□ 0.37
RETREG3-210ENST00000590541 NTAN1Q96AB6 310 aa17.34■□□□□ 0.37
RETREG3-210ENST00000590541 WDR26Q9H7D7 661 aa17.34■□□□□ 0.37
RETREG3-210ENST00000590541 GPN2Q9H9Y4 310 aaPredicted RBP17.34■□□□□ 0.37
RETREG3-210ENST00000590541 CARS2Q9HA77 564 aaKnown RBP17.34■□□□□ 0.37
RETREG3-210ENST00000590541 TAAR2Q9P1P5 351 aa17.34■□□□□ 0.37
RETREG3-210ENST00000590541 ST14Q9Y5Y6 855 aa17.34■□□□□ 0.37
RETREG3-210ENST00000590541 IGHV1OR21-1A0A087WYE8 117 aa17.33■□□□□ 0.36
RETREG3-210ENST00000590541 PRR19A6NJB7 356 aa17.33■□□□□ 0.36
RETREG3-210ENST00000590541 EFCAB7A8K855 629 aa17.33■□□□□ 0.36
RETREG3-210ENST00000590541 B4E171 279 aa17.33■□□□□ 0.36
RETREG3-210ENST00000590541 PPM1DO15297 605 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms