RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 ACP1P24666 158 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 CDC25BP30305 580 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 ETV3P41162 512 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 MARCKSL1P49006 195 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 NR2C2P49116 596 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 HK3P52790 923 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 CLDN6P56747 220 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 E2F1Q01094 437 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 ZBTB17Q13105 803 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 ILKQ13418 452 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 SMAD1Q15797 465 aaKnown RBP12.09□□□□□ -0.47
TPM4-212ENST00000590180 ALG11Q2TAA5 492 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 TFDP3Q5H9I0 405 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 CCDC181Q5TID7 509 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 CRTC1Q6UUV9 634 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 Q6ZVL8 140 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 KDELC2Q7Z4H8 507 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 NT5DC3Q86UY8 548 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 TMPRSS12Q86WS5 348 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 CBARPQ8N350 705 aaPredicted RBP12.09□□□□□ -0.47
TPM4-212ENST00000590180 CNTD1Q8N815 330 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 EXD1Q8NHP7 514 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 TFB1MQ8WVM0 346 aaKnown RBP12.09□□□□□ -0.47
TPM4-212ENST00000590180 SCG3Q8WXD2 468 aaKnown RBP12.09□□□□□ -0.47
TPM4-212ENST00000590180 KRT35Q92764 455 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 P3H4Q92791 437 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 GATA6Q92908 595 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 GLMNQ92990 594 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 FUBP1Q96AE4 644 aaKnown RBP12.09□□□□□ -0.47
TPM4-212ENST00000590180 RBM41Q96IZ5 413 aaKnown RBP12.09□□□□□ -0.47
TPM4-212ENST00000590180 MCCC1Q96RQ3 725 aaPredicted RBP12.09□□□□□ -0.47
TPM4-212ENST00000590180 HEMGNQ9BXL5 484 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 TDRD1Q9BXT4 1180 aaKnown RBP12.09□□□□□ -0.47
TPM4-212ENST00000590180 LACRTQ9GZZ8 138 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 ABCG4Q9H172 646 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 GULP1Q9UBP9 304 aa12.09□□□□□ -0.47
TPM4-212ENST00000590180 PNMA8BQ9ULN7 279 aaPredicted RBP12.09□□□□□ -0.47
TPM4-212ENST00000590180 REXO2Q9Y3B8 237 aaKnown RBP12.09□□□□□ -0.47
TPM4-212ENST00000590180 A0A0J9YYE9 177 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 TMEM202A6NGA9 273 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 LMO7DNF2Z398 122 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 PSMD11O00231 422 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 TPP1O14773 563 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 YY2O15391 372 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 PRLP01236 227 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 TRBC1P01850 177 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 CKMT1AP12532 417 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 TGM2P21980 687 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 TRIM23P36406 574 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 VAV2P52735 878 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 RPL26P61254 145 aaKnown RBP12.08□□□□□ -0.48
TPM4-212ENST00000590180 SKOR1P84550 965 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 PTSQ03393 145 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 ADCY2Q08462 1091 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 KIF5AQ12840 1032 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 ELOCQ15369 112 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 TAZQ16635 292 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 CDKN3Q16667 212 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 TEX44Q53QW1 395 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 LRRC66Q68CR7 880 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 ALG1LQ6GMV1 187 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 RAET1GQ6H3X3 334 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 ESRP1Q6NXG1 681 aaKnown RBP12.08□□□□□ -0.48
TPM4-212ENST00000590180 ZCCHC8Q6NZY4 707 aaKnown RBP12.08□□□□□ -0.48
TPM4-212ENST00000590180 RFLNAQ6ZTI6 216 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 NYAP1Q6ZVC0 841 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 ZC3H18Q86VM9 953 aaKnown RBP12.08□□□□□ -0.48
TPM4-212ENST00000590180 PELI3Q8N2H9 469 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 TXLNBQ8N3L3 684 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 FSTL5Q8N475 847 aaPredicted RBP12.08□□□□□ -0.48
TPM4-212ENST00000590180 FAM181AQ8N9Y4 354 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 OR56A4Q8NGH8 313 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 HAUS1Q96CS2 278 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 DTD2Q96FN9 168 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 OLFM3Q96PB7 478 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 RBM15Q96T37 977 aaKnown RBP eCLIP12.08□□□□□ -0.48
TPM4-212ENST00000590180 MLPHQ9BV36 600 aaPredicted RBP12.08□□□□□ -0.48
TPM4-212ENST00000590180 LRRC61Q9BV99 259 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 LGR4Q9BXB1 951 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 TMEM121BQ9BXQ6 578 aaPredicted RBP12.08□□□□□ -0.48
TPM4-212ENST00000590180 ADGRE3Q9BY15 652 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 WDR26Q9H7D7 661 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 CYP4F12Q9HCS2 524 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 PHPT1Q9NRX4 125 aaPredicted RBP12.08□□□□□ -0.48
TPM4-212ENST00000590180 CD84Q9UIB8 345 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 RPL26L1Q9UNX3 145 aaKnown RBP12.08□□□□□ -0.48
TPM4-212ENST00000590180 PCDHA3Q9Y5H8 950 aa12.08□□□□□ -0.48
TPM4-212ENST00000590180 hCG_1818297A0A087WSY0 165 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 TRABD2BA6NFA1 517 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 BTNL10A8MVZ5 291 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 ANKRD66B4E2M5 251 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 PJA2O43164 708 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 CLDN7O95471 211 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 CELA2BP08218 269 aaPredicted RBP12.07□□□□□ -0.48
TPM4-212ENST00000590180 MMP2P08253 660 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 HOXC4P09017 264 aaPredicted RBP12.07□□□□□ -0.48
TPM4-212ENST00000590180 PECAM1P16284 738 aaPredicted RBP12.07□□□□□ -0.48
TPM4-212ENST00000590180 CETN2P41208 172 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 GPR1P46091 355 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 RPIAP49247 311 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms