RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 NUS1Q96E22 293 aa21.33■■□□□ 1.01
ATG4D-212ENST00000590096 MRGPRX2Q96LB1 330 aa21.33■■□□□ 1.01
ATG4D-212ENST00000590096 BMFQ96LC9 184 aa21.33■■□□□ 1.01
ATG4D-212ENST00000590096 COQ10AQ96MF6 247 aa21.33■■□□□ 1.01
ATG4D-212ENST00000590096 WDR24Q96S15 920 aa21.33■■□□□ 1.01
ATG4D-212ENST00000590096 SRPK1Q96SB4 655 aaKnown RBP21.33■■□□□ 1.01
ATG4D-212ENST00000590096 MBNL1Q9NR56 388 aaKnown RBP21.33■■□□□ 1.01
ATG4D-212ENST00000590096 CDV3Q9UKY7 258 aaKnown RBP21.33■■□□□ 1.01
ATG4D-212ENST00000590096 TTC7AQ9ULT0 858 aaPredicted RBP21.33■■□□□ 1.01
ATG4D-212ENST00000590096 C1orf232A0A0U1RR37 186 aa21.32■■□□□ 1
ATG4D-212ENST00000590096 LOC285095A0A1B0GVY8 99 aa21.32■■□□□ 1
ATG4D-212ENST00000590096 GOLGA8CPA6NN73 597 aa21.32■■□□□ 1
ATG4D-212ENST00000590096 EPOP01588 193 aa21.32■■□□□ 1
ATG4D-212ENST00000590096 SDHBP21912 280 aa21.32■■□□□ 1
ATG4D-212ENST00000590096 PARP6Q2NL67 630 aa21.32■■□□□ 1
ATG4D-212ENST00000590096 WSCD2Q2TBF2 565 aa21.32■■□□□ 1
ATG4D-212ENST00000590096 UAP1L1Q3KQV9 507 aa21.32■■□□□ 1
ATG4D-212ENST00000590096 Q6ZSR6 202 aa21.32■■□□□ 1
ATG4D-212ENST00000590096 HSD11B1LQ7Z5J1 315 aa21.32■■□□□ 1
ATG4D-212ENST00000590096 C17orf53Q8N3J3 647 aaPredicted RBP21.32■■□□□ 1
ATG4D-212ENST00000590096 CCDC89Q8N998 374 aa21.32■■□□□ 1
ATG4D-212ENST00000590096 OR2I1PQ8NGU4 316 aa21.32■■□□□ 1
ATG4D-212ENST00000590096 CCHCR1Q8TD31 782 aa21.32■■□□□ 1
ATG4D-212ENST00000590096 COG1Q8WTW3 980 aa21.32■■□□□ 1
ATG4D-212ENST00000590096 MS4A14Q96JA4 679 aa21.32■■□□□ 1
ATG4D-212ENST00000590096 KNL1Q8NG31 2342 aa21.32■■□□□ 1
ATG4D-212ENST00000590096 CTAGE9A4FU28 777 aa21.31■■□□□ 1
ATG4D-212ENST00000590096 TOR1BO14657 336 aa21.31■■□□□ 1
ATG4D-212ENST00000590096 DFNA5O60443 496 aa21.31■■□□□ 1
ATG4D-212ENST00000590096 CLDN7O95471 211 aa21.31■■□□□ 1
ATG4D-212ENST00000590096 PCCBP05166 539 aa21.31■■□□□ 1
ATG4D-212ENST00000590096 GM2AP17900 193 aa21.31■■□□□ 1
ATG4D-212ENST00000590096 HLA-DPA1P20036 260 aa21.31■■□□□ 1
ATG4D-212ENST00000590096 ETV3P41162 512 aa21.31■■□□□ 1
ATG4D-212ENST00000590096 GSTA5Q7RTV2 222 aa21.31■■□□□ 1
ATG4D-212ENST00000590096 OXR1Q8N573 874 aa21.31■■□□□ 1
ATG4D-212ENST00000590096 SLC25A41Q8N5S1 370 aa21.31■■□□□ 1
ATG4D-212ENST00000590096 ACTRT1Q8TDG2 376 aa21.31■■□□□ 1
ATG4D-212ENST00000590096 DTD2Q96FN9 168 aa21.31■■□□□ 1
ATG4D-212ENST00000590096 GORASP1Q9BQQ3 440 aa21.31■■□□□ 1
ATG4D-212ENST00000590096 FICDQ9BVA6 458 aa21.31■■□□□ 1
ATG4D-212ENST00000590096 MAGEE1Q9HCI5 957 aa21.31■■□□□ 1
ATG4D-212ENST00000590096 DNAAF2Q9NVR5 837 aaKnown RBP21.31■■□□□ 1
ATG4D-212ENST00000590096 DRG1Q9Y295 367 aaKnown RBP21.31■■□□□ 1
ATG4D-212ENST00000590096 TMEM131Q92545 1883 aa21.3■■□□□ 1
ATG4D-212ENST00000590096 A0A0U1RQS6 177 aa21.3■■□□□ 1
ATG4D-212ENST00000590096 FGF1P05230 155 aa21.3■■□□□ 1
ATG4D-212ENST00000590096 PIRTP0C851 137 aa21.3■■□□□ 1
ATG4D-212ENST00000590096 STC1P52823 247 aa21.3■■□□□ 1
ATG4D-212ENST00000590096 THOP1P52888 689 aa21.3■■□□□ 1
ATG4D-212ENST00000590096 YPEL5P62699 121 aa21.3■■□□□ 1
ATG4D-212ENST00000590096 FOXK2Q01167 660 aa21.3■■□□□ 1
ATG4D-212ENST00000590096 PTSQ03393 145 aa21.3■■□□□ 1
ATG4D-212ENST00000590096 MTM1Q13496 603 aa21.3■■□□□ 1
ATG4D-212ENST00000590096 SLC1A5Q15758 541 aa21.3■■□□□ 1
ATG4D-212ENST00000590096 RSPO4Q2I0M5 234 aaPredicted RBP21.3■■□□□ 1
ATG4D-212ENST00000590096 ZNF423Q2M1K9 1284 aa21.3■■□□□ 1
ATG4D-212ENST00000590096 SIRPB2Q5JXA9 342 aa21.3■■□□□ 1
ATG4D-212ENST00000590096 SPATS2Q86XZ4 545 aaKnown RBP21.3■■□□□ 1
ATG4D-212ENST00000590096 CBARPQ8N350 705 aaPredicted RBP21.3■■□□□ 1
ATG4D-212ENST00000590096 PRELID2Q8N945 189 aa21.3■■□□□ 1
ATG4D-212ENST00000590096 ELF4Q99607 663 aaPredicted RBP21.3■■□□□ 1
ATG4D-212ENST00000590096 ERVMER34-1Q9H9K5 563 aa21.3■■□□□ 1
ATG4D-212ENST00000590096 ZFYVE1Q9HBF4 777 aa21.3■■□□□ 1
ATG4D-212ENST00000590096 PKD2L2Q9NZM6 624 aa21.3■■□□□ 1
ATG4D-212ENST00000590096 LAMA1P25391 3075 aa21.29■■□□□ 1
ATG4D-212ENST00000590096 GOLGA6L10A0A0M3HER8 536 aa21.29■■□□□ 1
ATG4D-212ENST00000590096 C1SP09871 688 aa21.29■■□□□ 1
ATG4D-212ENST00000590096 ATXN1LP0C7T5 689 aaKnown RBP21.29■■□□□ 1
ATG4D-212ENST00000590096 ARRB1P49407 418 aaPredicted RBP21.29■■□□□ 1
ATG4D-212ENST00000590096 CCT8P50990 548 aa21.29■■□□□ 1
ATG4D-212ENST00000590096 PFN3P60673 137 aa21.29■■□□□ 1
ATG4D-212ENST00000590096 PDE1CQ14123 709 aaPredicted RBP21.29■■□□□ 1
ATG4D-212ENST00000590096 PTK2BQ14289 1009 aa21.29■■□□□ 1
ATG4D-212ENST00000590096 INPP5AQ14642 412 aa21.29■■□□□ 1
ATG4D-212ENST00000590096 PAPD7Q5XG87 772 aaKnown RBP21.29■■□□□ 1
ATG4D-212ENST00000590096 Q6ZVL8 140 aa21.29■■□□□ 1
ATG4D-212ENST00000590096 LYSMD3Q7Z3D4 306 aa21.29■■□□□ 1
ATG4D-212ENST00000590096 RAVER1Q8IY67 606 aaKnown RBP21.29■■□□□ 1
ATG4D-212ENST00000590096 AP1M1Q9BXS5 423 aa21.29■■□□□ 1
ATG4D-212ENST00000590096 GPR63Q9BZJ6 419 aa21.29■■□□□ 1
ATG4D-212ENST00000590096 IL21RQ9HBE5 538 aa21.29■■□□□ 1
ATG4D-212ENST00000590096 SHOC2Q9UQ13 582 aa21.29■■□□□ 1
ATG4D-212ENST00000590096 FNDC3AQ9Y2H6 1198 aaKnown RBP21.29■■□□□ 1
ATG4D-212ENST00000590096 ZNF711Q9Y462 761 aa21.29■■□□□ 1
ATG4D-212ENST00000590096 SAR1BQ9Y6B6 198 aa21.29■■□□□ 1
ATG4D-212ENST00000590096 SLC30A4O14863 429 aa21.28■■□□□ 1
ATG4D-212ENST00000590096 ZNF185O15231 689 aa21.28■■□□□ 1
ATG4D-212ENST00000590096 PSMD3O43242 534 aa21.28■■□□□ 1
ATG4D-212ENST00000590096 METTL18O95568 372 aa21.28■■□□□ 1
ATG4D-212ENST00000590096 AGTP01019 485 aa21.28■■□□□ 1
ATG4D-212ENST00000590096 SLC4A1P02730 911 aa21.28■■□□□ 1
ATG4D-212ENST00000590096 ZNF883P0CG24 379 aa21.28■■□□□ 1
ATG4D-212ENST00000590096 FDFT1P37268 417 aa21.28■■□□□ 1
ATG4D-212ENST00000590096 CHRNA4P43681 627 aa21.28■■□□□ 1
ATG4D-212ENST00000590096 CDKN3Q16667 212 aa21.28■■□□□ 1
ATG4D-212ENST00000590096 FAXCQ5TGI0 409 aa21.28■■□□□ 1
ATG4D-212ENST00000590096 ESRP1Q6NXG1 681 aaKnown RBP21.28■■□□□ 1
ATG4D-212ENST00000590096 TECPR1Q7Z6L1 1165 aa21.28■■□□□ 1
ATG4D-212ENST00000590096 NRSN1Q8IZ57 195 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms