RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 MSTO1Q9BUK6 570 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 FUT8Q9BYC5 575 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 IKZF4Q9H2S9 585 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 SEL1LQ9UBV2 794 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 B4GALT6Q9UBX8 382 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 FBXO10Q9UK96 956 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 CA5BQ9Y2D0 317 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 PCDHGA8Q9Y5G5 932 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 TLR4O00206 839 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 HNRNPDLO14979 420 aaKnown RBP7.98□□□□□ -1.13
SMAD4-209ENST00000589941 MDM4O15151 490 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 URI1O94763 535 aaPredicted RBP7.98□□□□□ -1.13
SMAD4-209ENST00000589941 MPIG6BO95866 241 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 TBX18O95935 607 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 KRT7P08729 469 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 THEGLP0DJG4 465 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 HGFP14210 728 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 PRF1P14222 555 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 GNLYP22749 145 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 PAX3P23760 479 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 ANXA13P27216 316 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 SLC5A2P31639 672 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 MLLT10P55197 1068 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 POLE2P56282 527 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 CATSPEREQ5SY80 951 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 TEX35Q5T0J7 233 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 TRMT10BQ6PF06 316 aaKnown RBP7.98□□□□□ -1.13
SMAD4-209ENST00000589941 ZC3H3Q8IXZ2 948 aaKnown RBP7.98□□□□□ -1.13
SMAD4-209ENST00000589941 DIS3L2Q8IYB7 885 aaKnown RBP7.98□□□□□ -1.13
SMAD4-209ENST00000589941 NXPE1Q8N323 547 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 TXLNBQ8N3L3 684 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 SCAMP5Q8TAC9 235 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 CXorf38Q8TB03 319 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 MAPK15Q8TD08 544 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 ASB15Q8WXK1 588 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 GOLGA1Q92805 767 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 SMARCE1Q969G3 411 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 PCED1BQ96HM7 432 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 PIWIL1Q96J94 861 aaKnown RBP7.98□□□□□ -1.13
SMAD4-209ENST00000589941 APOLD1Q96LR9 279 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 ZNF560Q96MR9 790 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 ZNF518BQ9C0D4 1074 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 TSPYL1Q9H0U9 437 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 ZNF71Q9NQZ8 489 aaPredicted RBP7.98□□□□□ -1.13
SMAD4-209ENST00000589941 MYO1AQ9UBC5 1043 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 SLC27A6Q9Y2P4 619 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 C2CD2Q9Y426 696 aa7.98□□□□□ -1.13
SMAD4-209ENST00000589941 ESPL1Q14674 2120 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 SPG11Q96JI7 2443 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 A0A087X0B3 334 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 A0A0B4J269 797 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 ZNF891A8MT65 544 aaPredicted RBP7.97□□□□□ -1.13
SMAD4-209ENST00000589941 AKR1B15C9JRZ8 316 aaPredicted RBP7.97□□□□□ -1.13
SMAD4-209ENST00000589941 GABRDO14764 452 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 DIAPH2O60879 1101 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 MFAP3LO75121 409 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 PENKP01210 267 aaPredicted RBP7.97□□□□□ -1.13
SMAD4-209ENST00000589941 ITGB3P05106 788 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 ITGA2BP08514 1039 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 CCDC175P0C221 793 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 HOXA5P20719 270 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 CDC25AP30304 524 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 SDHAP31040 664 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 CCT6AP40227 531 aaKnown RBP7.97□□□□□ -1.13
SMAD4-209ENST00000589941 LIG4P49917 911 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 GALCP54803 685 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 ARHGAP44Q17R89 818 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 SOWAHAQ2M3V2 549 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 MDH1BQ5I0G3 518 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 HECTD3Q5T447 861 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 CAPRIN2Q6IMN6 1127 aaKnown RBP7.97□□□□□ -1.13
SMAD4-209ENST00000589941 RINT1Q6NUQ1 792 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 VSTM1Q6UX27 236 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 ZNF662Q6ZS27 426 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 TTLL10Q6ZVT0 673 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 C1orf186Q6ZWK4 172 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 HTR3DQ70Z44 454 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 ANKS1BQ7Z6G8 1248 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 CEP112Q8N8E3 955 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 NUDT10Q8NFP7 164 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 IFI44Q8TCB0 444 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 HPS3Q969F9 1004 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 FBXO32Q969P5 355 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 NUDT11Q96G61 164 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 SERAC1Q96JX3 654 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 SLITRK1Q96PX8 696 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 GSDMAQ96QA5 445 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 CIPCQ9C0C6 399 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 TMEM245Q9H330 911 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 MRPL44Q9H9J2 332 aaKnown RBP7.97□□□□□ -1.13
SMAD4-209ENST00000589941 ERVMER34-1Q9H9K5 563 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 SGK2Q9HBY8 427 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 ARFGAP3Q9NP61 516 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 PRSS16Q9NQE7 514 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 ELOVL2Q9NXB9 296 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 WDR35Q9P2L0 1181 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 LIMA1Q9UHB6 759 aaKnown RBP7.97□□□□□ -1.13
SMAD4-209ENST00000589941 CHORDC1Q9UHD1 332 aaPredicted RBP7.97□□□□□ -1.13
SMAD4-209ENST00000589941 CDC23Q9UJX2 597 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 ANAPC2Q9UJX6 822 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms