RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 TSPYL1Q9H0U9 437 aa12.18□□□□□ -0.46
DNMT1-218ENST00000589294 CDH19Q9H159 772 aa12.18□□□□□ -0.46
DNMT1-218ENST00000589294 C6orf106Q9H6K1 298 aaPredicted RBP12.18□□□□□ -0.46
DNMT1-218ENST00000589294 RAD18Q9NS91 495 aa12.18□□□□□ -0.46
DNMT1-218ENST00000589294 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.18□□□□□ -0.46
DNMT1-218ENST00000589294 GGT7Q9UJ14 662 aa12.18□□□□□ -0.46
DNMT1-218ENST00000589294 RIMKLBQ9ULI2 386 aa12.18□□□□□ -0.46
DNMT1-218ENST00000589294 ZFR2Q9UPR6 939 aaKnown RBP12.18□□□□□ -0.46
DNMT1-218ENST00000589294 INVSQ9Y283 1065 aa12.18□□□□□ -0.46
DNMT1-218ENST00000589294 ITM2BQ9Y287 266 aa12.18□□□□□ -0.46
DNMT1-218ENST00000589294 ZNF711Q9Y462 761 aa12.18□□□□□ -0.46
DNMT1-218ENST00000589294 ZNF318Q5VUA4 2279 aa12.18□□□□□ -0.46
DNMT1-218ENST00000589294 HEATR9A2RTY3 570 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 MROH6A6NGR9 719 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 GOLGA8MH3BSY2 632 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 WNT9AO14904 365 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 LZTS3O60299 673 aaPredicted RBP12.17□□□□□ -0.46
DNMT1-218ENST00000589294 AVILO75366 819 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 RHOBTB1O94844 696 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 RHOXF2BP0C7M4 288 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 C6P13671 934 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 PSMA3P25788 255 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 PLTPP55058 493 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 ARL4CP56559 192 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 SESN2P58004 480 aaPredicted RBP12.17□□□□□ -0.46
DNMT1-218ENST00000589294 SEMG2Q02383 582 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 CUL1Q13616 776 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 POU6F1Q14863 301 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 TRADDQ15628 312 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 CNGA3Q16281 694 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 SKIDA1Q1XH10 827 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 DNAJC21Q5F1R6 531 aaKnown RBP12.17□□□□□ -0.46
DNMT1-218ENST00000589294 ZDHHC20Q5W0Z9 365 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 ZC3H14Q6PJT7 736 aaKnown RBP12.17□□□□□ -0.46
DNMT1-218ENST00000589294 LYSMD3Q7Z3D4 306 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 GLT6D1Q7Z4J2 308 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 TECPR1Q7Z6L1 1165 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 TTC30BQ8N4P2 665 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 ZCCHC9Q8N567 271 aaKnown RBP12.17□□□□□ -0.46
DNMT1-218ENST00000589294 EIF1ADQ8N9N8 165 aaKnown RBP12.17□□□□□ -0.46
DNMT1-218ENST00000589294 PEX13Q92968 403 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 EID2BQ96D98 161 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 LRRC39Q96DD0 335 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 HINFPQ9BQA5 517 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 RHOXF2Q9BQY4 288 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 RRAGDQ9NQL2 400 aaPredicted RBP12.17□□□□□ -0.46
DNMT1-218ENST00000589294 GDF3Q9NR23 364 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 IL17CQ9P0M4 197 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 DMTF1Q9Y222 760 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.17□□□□□ -0.46
DNMT1-218ENST00000589294 KMT2EQ8IZD2 1858 aa12.17□□□□□ -0.46
DNMT1-218ENST00000589294 PRR23AA6NEV1 266 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 AURKAO14965 403 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 EIF3HO15372 352 aaKnown RBP eCLIP12.16□□□□□ -0.46
DNMT1-218ENST00000589294 STX7O15400 261 aaKnown RBP12.16□□□□□ -0.46
DNMT1-218ENST00000589294 LDB2O43679 373 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 PAK4O96013 591 aaPredicted RBP12.16□□□□□ -0.46
DNMT1-218ENST00000589294 IGHV4-34P06331 123 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 BCKDHBP21953 392 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 HADHAP40939 763 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 SPINT3P49223 89 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 DPTQ07507 201 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 ACOX1Q15067 660 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 ELF2Q15723 593 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 HIF1AQ16665 826 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 SETMARQ53H47 684 aaPredicted RBP12.16□□□□□ -0.46
DNMT1-218ENST00000589294 WDR45BQ5MNZ6 344 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 TEX35Q5T0J7 233 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 FNBP1LQ5T0N5 605 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 SEL1L3Q68CR1 1132 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 ZDHHC24Q6UX98 284 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 CEP128Q6ZU80 1094 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 CEP68Q76N32 757 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 ZNF765Q7L2R6 523 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 HSD11B1LQ7Z5J1 315 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 CCNJLQ8IV13 435 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 PPHLN1Q8NEY8 458 aaKnown RBP12.16□□□□□ -0.46
DNMT1-218ENST00000589294 FBXO25Q8TCJ0 367 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 DTX3LQ8TDB6 740 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 STYXQ8WUJ0 223 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 IFT81Q8WYA0 676 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 DNASE2BQ8WZ79 361 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 UBXN4Q92575 508 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 RUBCNQ92622 972 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 BIRC7Q96CA5 298 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 SIGLEC10Q96LC7 697 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 NAT9Q9BTE0 207 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 KIFC1Q9BW19 673 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 PHACTR1Q9C0D0 580 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 MRM3Q9HC36 420 aaKnown RBP12.16□□□□□ -0.46
DNMT1-218ENST00000589294 ZDHHC18Q9NUE0 388 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 PIH1D1Q9NWS0 290 aaKnown RBP12.16□□□□□ -0.46
DNMT1-218ENST00000589294 PKD2L2Q9NZM6 624 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 PKP3Q9Y446 797 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 HS3ST3A1Q9Y663 406 aa12.16□□□□□ -0.46
DNMT1-218ENST00000589294 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.15□□□□□ -0.46
DNMT1-218ENST00000589294 ESYT3A0FGR9 886 aa12.15□□□□□ -0.46
DNMT1-218ENST00000589294 PRAMEF26H0Y7S4 382 aa12.15□□□□□ -0.46
DNMT1-218ENST00000589294 RECQL5O94762 991 aaPredicted RBP12.15□□□□□ -0.46
DNMT1-218ENST00000589294 FSBPO95073 299 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms