RNA–Protein interactions for RNA: ENST00000589253.1

TOMM40-204, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

TSL 3

Gene TOMM40, Length 207 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-204ENST00000589253 SRLQ86TD4 932 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 ZSWIM9Q86XI8 627 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 SPATS2Q86XZ4 545 aaKnown RBP11.73□□□□□ -0.53
TOMM40-204ENST00000589253 TMIEQ8NEW7 156 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 SLC35B2Q8TB61 432 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 ARRDC2Q8TBH0 407 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 CCDC97Q96F63 343 aaPredicted RBP11.73□□□□□ -0.53
TOMM40-204ENST00000589253 KLHDC7BQ96G42 594 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 MS4A14Q96JA4 679 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 HIC2Q96JB3 615 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 CCDC114Q96M63 670 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 ZNF106Q9H2Y7 1883 aaKnown RBP11.73□□□□□ -0.53
TOMM40-204ENST00000589253 POLR1BQ9H9Y6 1135 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 RBM22Q9NW64 420 aaKnown RBP eCLIP11.73□□□□□ -0.53
TOMM40-204ENST00000589253 DNPEPQ9ULA0 475 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 SNX12Q9UMY4 172 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 ATP8A1Q9Y2Q0 1164 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 PTPRQQ9UMZ3 2332 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 NEMP2A6NFY4 417 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 HACD1B0YJ81 288 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 H7C0C1 242 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 KRIT1O00522 736 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 TRIM38O00635 465 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 SPINT1O43278 529 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 PLRG1O43660 514 aaKnown RBP11.72□□□□□ -0.53
TOMM40-204ENST00000589253 OPA1O60313 960 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 RNGTTO60942 597 aaKnown RBP11.72□□□□□ -0.53
TOMM40-204ENST00000589253 CSO75390 466 aaKnown RBP11.72□□□□□ -0.53
TOMM40-204ENST00000589253 DXOO77932 396 aaKnown RBP11.72□□□□□ -0.53
TOMM40-204ENST00000589253 POP4O95707 220 aaKnown RBP11.72□□□□□ -0.53
TOMM40-204ENST00000589253 FGGP02679 453 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 PRNPP04156 253 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 UGT2B4P06133 528 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 GP1BAP07359 652 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 MMP2P08253 660 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 RBP3P10745 1247 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 RBMS1P29558 406 aaKnown RBP11.72□□□□□ -0.53
TOMM40-204ENST00000589253 HSPA9P38646 679 aaKnown RBP11.72□□□□□ -0.53
TOMM40-204ENST00000589253 ATP5OP48047 213 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 LSSP48449 732 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 CSNK1DP48730 415 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 SCNN1BP51168 640 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 RENBPP51606 427 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 GDF10P55107 478 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 TAS2R38P59533 333 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 NSUN2Q08J23 767 aaKnown RBP eCLIP11.72□□□□□ -0.53
TOMM40-204ENST00000589253 CNTN1Q12860 1018 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 OASLQ15646 514 aaKnown RBP11.72□□□□□ -0.53
TOMM40-204ENST00000589253 CCDC181Q5TID7 509 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 PAPD7Q5XG87 772 aaKnown RBP11.72□□□□□ -0.53
TOMM40-204ENST00000589253 BZW1Q7L1Q6 419 aaKnown RBP11.72□□□□□ -0.53
TOMM40-204ENST00000589253 PARS2Q7L3T8 475 aaKnown RBP11.72□□□□□ -0.53
TOMM40-204ENST00000589253 TRIM69Q86WT6 500 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 RYBPQ8N488 228 aaPredicted RBP11.72□□□□□ -0.53
TOMM40-204ENST00000589253 OR4C6Q8NH72 309 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 C1orf54Q8WWF1 131 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 MED8Q96G25 268 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 KLHL32Q96NJ5 620 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 NUDCD1Q96RS6 583 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 NAPGQ99747 312 aaPredicted RBP11.72□□□□□ -0.53
TOMM40-204ENST00000589253 SEMA3CQ99985 751 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 GORASP1Q9BQQ3 440 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 CPEB1Q9BZB8 566 aaKnown RBP11.72□□□□□ -0.53
TOMM40-204ENST00000589253 BRD8Q9H0E9 1235 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 USP29Q9HBJ7 922 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 NOD2Q9HC29 1040 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 SEPT10Q9P0V9 454 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 HEMK1Q9Y5R4 338 aaPredicted RBP11.72□□□□□ -0.53
TOMM40-204ENST00000589253 KNTC1P50748 2209 aa11.72□□□□□ -0.53
TOMM40-204ENST00000589253 ZFC3H1O60293 1989 aaKnown RBP11.71□□□□□ -0.53
TOMM40-204ENST00000589253 LRP4O75096 1905 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 TSPAN11A1L157 253 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 KPNA3O00505 521 aaPredicted RBP11.71□□□□□ -0.53
TOMM40-204ENST00000589253 TRAFD1O14545 582 aaPredicted RBP11.71□□□□□ -0.53
TOMM40-204ENST00000589253 LIASO43766 372 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 THEGLP0DJG4 465 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 CKMT1AP12532 417 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 DGKAP23743 735 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 ITGB7P26010 798 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 MSNP26038 577 aaKnown RBP11.71□□□□□ -0.53
TOMM40-204ENST00000589253 ABL2P42684 1182 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 CCDC15Q0P6D6 951 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 TRAF2Q12933 501 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 KCTD19Q17RG1 926 aaPredicted RBP11.71□□□□□ -0.53
TOMM40-204ENST00000589253 TEX44Q53QW1 395 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 LRRC73Q5JTD7 316 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 PRICKLE2Q7Z3G6 844 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 CAMK1DQ8IU85 385 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 ZNF567Q8N184 647 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 PRELID2Q8N945 189 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 TTC13Q8NBP0 860 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 NSMCE1Q8WV22 266 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 HTR3CQ8WXA8 447 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 ECHDC3Q96DC8 303 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 PBKQ96KB5 322 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 TEKT5Q96M29 485 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 AGAP3Q96P47 875 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 DUSP23Q9BVJ7 150 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 PREBQ9HCU5 417 aa11.71□□□□□ -0.53
TOMM40-204ENST00000589253 AMACRQ9UHK6 382 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms