RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 TSHRP16473 764 aa16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 LHCGRP22888 699 aa16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 CNR2P34972 360 aa16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 LIG3P49916 1009 aa16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 DCDC1P59894 354 aa16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 CREB5Q02930 508 aa16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 CNGA3Q16281 694 aa16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 CDKN3Q16667 212 aa16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 LRRC73Q5JTD7 316 aa16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 TMEM31Q5JXX7 168 aa16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 LIPIQ6XZB0 460 aa16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 CCNI2Q6ZMN8 369 aaPredicted RBP16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 HORMAD1Q86X24 394 aa16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 CBARPQ8N350 705 aaPredicted RBP16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 TTC30BQ8N4P2 665 aa16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 PYROXD1Q8WU10 500 aa16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 ASB12Q8WXK4 309 aa16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 TOE1Q96GM8 510 aaKnown RBP16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 SIGLEC10Q96LC7 697 aa16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 TTC25Q96NG3 672 aa16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 EBNA1BP2Q99848 306 aaKnown RBP16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 TPSD1Q9BZJ3 242 aa16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 PIH1D1Q9NWS0 290 aaKnown RBP16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 WSB2Q9NYS7 404 aaPredicted RBP16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 TEX264Q9Y6I9 313 aa16.97■□□□□ 0.31
SCAMP4-211ENST00000588907 TBC1D3DA0A087WVF3 549 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 TBC1D3IA0A087WXS9 549 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 TBC1D3EA0A087X179 549 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 TBC1D3KA0A087X1G2 549 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 IGHV1OR15-9A0A0B4J2B8 117 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 TBC1D3FA6NER0 549 aaPredicted RBP16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 TBC1D3LB9A6J9 549 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 PLK4O00444 970 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 LZTS3O60299 673 aaPredicted RBP16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 NDUFS2O75306 463 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 SPAG6O75602 509 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 TM7SF2O76062 418 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 USP1O94782 785 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 CLDN7O95471 211 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 PRKCGP05129 697 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 PYGLP06737 847 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 GSTA2P09210 222 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 TBC1D3HP0C7X1 549 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 PIRTP0C851 137 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 C6P13671 934 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 PSMA3P25788 255 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 CCR5P51681 352 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 ZNF140P52738 457 aaPredicted RBP16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 VSNL1P62760 191 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 PTSQ03393 145 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 CSTF1Q05048 431 aaKnown RBP16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 AGERQ15109 404 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 SPDYCQ5MJ68 293 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 TSTD2Q5T7W7 516 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 TBC1D3GQ6DHY5 549 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 TBC1D3CQ6IPX1 549 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 EMBQ6PCB8 327 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 ZNF765Q7L2R6 523 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 TMEM135Q86UB9 458 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 FAM124AQ86V42 546 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 CCDC25Q86WR0 208 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 ZBED8Q8IZ13 594 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 TBC1D3Q8IZP1 549 aaPredicted RBP16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 CADM4Q8NFZ8 388 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 GABPB2Q8TAK5 448 aaPredicted RBP16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 DTX3LQ8TDB6 740 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 PLEKHG4BQ96PX9 1271 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 WRAP53Q9BUR4 548 aaKnown RBP16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 PARD6BQ9BYG5 372 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 SAYSD1Q9NPB0 183 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 IL17CQ9P0M4 197 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 ZC3H7BQ9UGR2 993 aaKnown RBP16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 ITM2BQ9Y287 266 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 ARL5AQ9Y689 179 aa16.96■□□□□ 0.31
SCAMP4-211ENST00000588907 CACNA1IQ9P0X4 2223 aa16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 WNT9AO14904 365 aa16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 ERLIN1O75477 346 aa16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 ACSL1P33121 698 aa16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 SPINT3P49223 89 aa16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 ACVR1Q04771 509 aa16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 SGCGQ13326 291 aa16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 FRG1Q14331 258 aaKnown RBP16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 ACOX1Q15067 660 aa16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 ELF2Q15723 593 aa16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 TMEM259Q4ZIN3 620 aa16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 SETMARQ53H47 684 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 SPANXN3Q5MJ09 141 aa16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 DENND2CQ68D51 928 aa16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 TSPAN33Q86UF1 283 aa16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 NLRP8Q86W28 1048 aa16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 FOXJ1Q92949 421 aa16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 DTD2Q96FN9 168 aa16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 PRRX2Q99811 253 aa16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 NLE1Q9NVX2 485 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 APPL1Q9UKG1 709 aa16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 RPS6KL1Q9Y6S9 549 aa16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 KMT2EQ8IZD2 1858 aa16.95■□□□□ 0.3
SCAMP4-211ENST00000588907 A0A1W2PQU0 124 aa16.94■□□□□ 0.3
SCAMP4-211ENST00000588907 H7C0S8 307 aa16.94■□□□□ 0.3
SCAMP4-211ENST00000588907 RNGTTO60942 597 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms