RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 TSPAN11A1L157 253 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 ANHXE9PGG2 379 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 H7C0S8 307 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 CD3EAPO15446 510 aaKnown RBP11.41□□□□□ -0.58
SMAD4-205ENST00000588745 GLRA3O75311 464 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 TYK2P29597 1187 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 CRHR1P34998 444 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 HNF1BP35680 557 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 HMGCLP35914 325 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 POLD2P49005 469 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 CSRP3P50461 194 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 CLCN5P51795 746 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 IL9RQ01113 521 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 ILF2Q12905 390 aaKnown RBP11.41□□□□□ -0.58
SMAD4-205ENST00000588745 PDE1CQ14123 709 aaPredicted RBP11.41□□□□□ -0.58
SMAD4-205ENST00000588745 PTPRRQ15256 657 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 SEPT7Q16181 437 aaKnown RBP11.41□□□□□ -0.58
SMAD4-205ENST00000588745 CDKN3Q16667 212 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 TYSND1Q2T9J0 566 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 FNDC3BQ53EP0 1204 aaKnown RBP11.41□□□□□ -0.58
SMAD4-205ENST00000588745 HHATQ5VTY9 493 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 MRNIPQ6NTE8 343 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 BRAT1Q6PJG6 821 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 LVRNQ6Q4G3 990 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 CDHR3Q6ZTQ4 885 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 USP45Q70EL2 814 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 CMC1Q7Z7K0 106 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 TAX1BP1Q86VP1 789 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 ACVR1CQ8NER5 493 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 GDAP1Q8TB36 358 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 CKAP2Q8WWK9 683 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 SCG3Q8WXD2 468 aaKnown RBP11.41□□□□□ -0.58
SMAD4-205ENST00000588745 LRIG1Q96JA1 1093 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 CABS1Q96KC9 395 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 KLHL32Q96NJ5 620 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 FAM111AQ96PZ2 611 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 C19orf43Q9BQ61 176 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 RPP25Q9BUL9 199 aaKnown RBP11.41□□□□□ -0.58
SMAD4-205ENST00000588745 OSBPL1AQ9BXW6 950 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 MTG2Q9H4K7 406 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 CAB39LQ9H9S4 337 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 IL17CQ9P0M4 197 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 SLC17A7Q9P2U7 560 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 IL36AQ9UHA7 158 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 SLC39A10Q9ULF5 831 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 PLA2G4CQ9UP65 541 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 PPIL1Q9Y3C6 166 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 PKP3Q9Y446 797 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 REV3LO60673 3130 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 COL4A2P08572 1712 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 TICRRQ7Z2Z1 1910 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 EDDM13A0A1B0GTR0 161 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 NPIPB15A6NHN6 443 aaPredicted RBP11.41□□□□□ -0.58
SMAD4-205ENST00000588745 H3BQ06 376 aaPredicted RBP11.41□□□□□ -0.58
SMAD4-205ENST00000588745 SOX1O00570 391 aaPredicted RBP11.41□□□□□ -0.58
SMAD4-205ENST00000588745 LEFTY1O75610 366 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 HAUS5O94927 633 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 KAT7O95251 611 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 MPOP05164 745 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 CTSLP07711 333 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 MC4RP32245 332 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 FOXN2P32314 431 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 ETV4P43268 484 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 CCT5P48643 541 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 STC1P52823 247 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 SEMA3AQ14563 771 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 ZNF234Q14588 700 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 USP10Q14694 798 aaKnown RBP11.41□□□□□ -0.58
SMAD4-205ENST00000588745 HNRNPA1L2Q32P51 320 aaKnown RBP11.41□□□□□ -0.58
SMAD4-205ENST00000588745 PREPLQ4J6C6 727 aaPredicted RBP11.41□□□□□ -0.58
SMAD4-205ENST00000588745 FASTKD1Q53R41 847 aaKnown RBP11.41□□□□□ -0.58
SMAD4-205ENST00000588745 ZNF789Q5FWF6 425 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 CNSTQ6PJW8 725 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 SLC41A1Q8IVJ1 513 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 ZNF366Q8N895 744 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 GPATCH11Q8N954 259 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 UCMAQ8WVF2 138 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 SCRN2Q96FV2 425 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 MAGEB18Q96M61 343 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 PAIP2Q9BPZ3 127 aaKnown RBP11.41□□□□□ -0.58
SMAD4-205ENST00000588745 SLC13A1Q9BZW2 595 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 EPN3Q9H201 632 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 C12orf65Q9H3J6 166 aaKnown RBP11.41□□□□□ -0.58
SMAD4-205ENST00000588745 BRD9Q9H8M2 597 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 ZFYVE1Q9HBF4 777 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 BPIFA1Q9NP55 256 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 CORO1CQ9ULV4 474 aaPredicted RBP11.41□□□□□ -0.58
SMAD4-205ENST00000588745 PLLPQ9Y342 182 aa11.41□□□□□ -0.58
SMAD4-205ENST00000588745 TRIOBPQ9H2D6 2365 aa11.4□□□□□ -0.58
SMAD4-205ENST00000588745 SPTBN5Q9NRC6 3674 aaKnown RBP11.4□□□□□ -0.58
SMAD4-205ENST00000588745 A0A096LPK6 155 aa11.4□□□□□ -0.59
SMAD4-205ENST00000588745 A0A0U1RQS6 177 aa11.4□□□□□ -0.59
SMAD4-205ENST00000588745 TBC1D3BA6NDS4 549 aa11.4□□□□□ -0.59
SMAD4-205ENST00000588745 GRXCR2A6NFK2 248 aa11.4□□□□□ -0.59
SMAD4-205ENST00000588745 CLDN7O95471 211 aa11.4□□□□□ -0.59
SMAD4-205ENST00000588745 S1PR4O95977 384 aa11.4□□□□□ -0.59
SMAD4-205ENST00000588745 TOP3BO95985 862 aaKnown RBP11.4□□□□□ -0.59
SMAD4-205ENST00000588745 APODP05090 189 aa11.4□□□□□ -0.59
SMAD4-205ENST00000588745 DHRS4L1P0CG22 281 aa11.4□□□□□ -0.59
SMAD4-205ENST00000588745 PRSS56P0CW18 603 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms