RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 KELP23276 732 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 KRT2P35908 639 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 SEPHS1P49903 392 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 ILF3Q12906 894 aaKnown RBP eCLIP6.88□□□□□ -1.31
TPM4-210ENST00000588507 INAQ16352 499 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 WSCD2Q2TBF2 565 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 UBAP2Q5T6F2 1119 aaKnown RBP6.88□□□□□ -1.31
TPM4-210ENST00000588507 PRAMEF17Q5VTA0 474 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 FAM69BQ5VUD6 431 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 PWWP2BQ6NUJ5 590 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 PRSS57Q6UWY2 283 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 C12orf54Q6X4T0 127 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 Q6ZPB1 254 aaPredicted RBP6.88□□□□□ -1.31
TPM4-210ENST00000588507 TRAPPC11Q7Z392 1133 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 PLXDC1Q8IUK5 500 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 PIAS4Q8N2W9 510 aaPredicted RBP6.88□□□□□ -1.31
TPM4-210ENST00000588507 C12orf29Q8N999 325 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 OR1N1Q8NGS0 311 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 CXorf40AQ8TE69 158 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 TNFRSF25Q93038 417 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 NLNQ9BYT8 704 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 CHST8Q9H2A9 424 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 EPS8L2Q9H6S3 715 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 SMYD3Q9H7B4 428 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 HECAQ9UBI9 543 aaPredicted RBP6.88□□□□□ -1.31
TPM4-210ENST00000588507 ODF2LQ9ULJ1 636 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 ZNF835Q9Y2P0 537 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 SEC16AO15027 2179 aa6.88□□□□□ -1.31
TPM4-210ENST00000588507 GOLGA8IPA6NC78 632 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 GOLGA8JA6NMD2 632 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 FAM90A27PA6NNH2 459 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 CACNB4O00305 520 aaPredicted RBP6.87□□□□□ -1.31
TPM4-210ENST00000588507 PEX12O00623 359 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 SPTLC2O15270 562 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 STX6O43752 255 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 IGLV3-27P01718 113 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 CRYABP02511 175 aaKnown RBP6.87□□□□□ -1.31
TPM4-210ENST00000588507 TRIM21P19474 475 aaKnown RBP6.87□□□□□ -1.31
TPM4-210ENST00000588507 MAPK9P45984 424 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 FASLGP48023 281 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 CXCR3P49682 368 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 KIAA1024LP59773 190 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 NUCB2P80303 420 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 KRTAP1-1Q07627 177 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 SURF1Q15526 300 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 ADCK5Q3MIX3 580 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 CATSPEREQ5SY80 951 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 NAPRTQ6XQN6 538 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 SPOCD1Q6ZMY3 1216 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 DPY19L3Q6ZPD9 716 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 SPPL2CQ8IUH8 684 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 LGI2Q8N0V4 545 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 EID3Q8N140 333 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 LRRC75A-AS1Q8N1F1 130 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 CATSPER1Q8NEC5 780 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 MYRIPQ8NFW9 859 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 LILRB4Q8NHJ6 448 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 NOC3LQ8WTT2 800 aaKnown RBP6.87□□□□□ -1.31
TPM4-210ENST00000588507 ASB5Q8WWX0 329 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 SH3KBP1Q96B97 665 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 ALG14Q96F25 216 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 C9orf72Q96LT7 481 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 UCK2Q9BZX2 261 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 NUCKS1Q9H1E3 243 aaKnown RBP6.87□□□□□ -1.31
TPM4-210ENST00000588507 PARVGQ9HBI0 331 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 BRMS1Q9HCU9 246 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 ATP13A2Q9NQ11 1180 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.87□□□□□ -1.31
TPM4-210ENST00000588507 NDFIP2Q9NV92 336 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 HS3ST2Q9Y278 367 aa6.87□□□□□ -1.31
TPM4-210ENST00000588507 C16orf96A6NNT2 1141 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 E9PLN8 166 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 TOX3O15405 576 aaPredicted RBP6.86□□□□□ -1.31
TPM4-210ENST00000588507 KLK8O60259 260 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 FAM13AO94988 1023 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 STAU1O95793 577 aaKnown RBP6.86□□□□□ -1.31
TPM4-210ENST00000588507 MT-CO1P00395 513 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 KLK3P07288 261 aaPredicted RBP6.86□□□□□ -1.31
TPM4-210ENST00000588507 CD53P19397 219 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 AK4P27144 223 aaPredicted RBP6.86□□□□□ -1.31
TPM4-210ENST00000588507 OTX2P32243 289 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 TBX4P57082 545 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 ZACNQ401N2 412 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 MIDNQ504T8 468 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 C10orf62Q5T681 223 aaPredicted RBP6.86□□□□□ -1.31
TPM4-210ENST00000588507 AGAP7PQ5VUJ5 663 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 KRT79Q5XKE5 535 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 B4GALNT3Q6L9W6 998 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 SLC30A9Q6PML9 568 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 CPLX2Q6PUV4 134 aaKnown RBP6.86□□□□□ -1.31
TPM4-210ENST00000588507 YTHDF3Q7Z739 585 aaKnown RBP6.86□□□□□ -1.31
TPM4-210ENST00000588507 MRGPREQ86SM8 312 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 CHD1LQ86WJ1 897 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 CXorf67Q86X51 503 aaPredicted RBP6.86□□□□□ -1.31
TPM4-210ENST00000588507 VWA5B2Q8N398 1253 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 PLEKHO2Q8TD55 490 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 EDEM1Q92611 657 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 CYFIP2Q96F07 1278 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 AGAP4Q96P64 663 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 DMRTA2Q96SC8 542 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms