RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 PPP2CAP67775 309 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 ACOX1Q15067 660 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 TAF1AQ15573 450 aaPredicted RBP9.07□□□□□ -0.96
CIRBP-218ENST00000588344 CNGA3Q16281 694 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 CDKN3Q16667 212 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 GLE1Q53GS7 698 aaKnown RBP9.07□□□□□ -0.96
CIRBP-218ENST00000588344 DNTTIP2Q5QJE6 756 aaKnown RBP9.07□□□□□ -0.96
CIRBP-218ENST00000588344 SEL1L3Q68CR1 1132 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 LRRC66Q68CR7 880 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 PDPK2PQ6A1A2 396 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 DENND5AQ6IQ26 1287 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 LRRC8BQ6P9F7 803 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 NLRP9Q7RTR0 991 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 TECPR1Q7Z6L1 1165 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 CTAGE6Q86UF2 777 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 HOOK3Q86VS8 718 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 CTAGE4Q8IX94 777 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 PPIL6Q8IXY8 311 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 DEFB119Q8N690 84 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 GLIS1Q8NBF1 620 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 C1orf216Q8TAB5 229 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 PEX13Q92968 403 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 CENPTQ96BT3 561 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 COQ10AQ96MF6 247 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 KRT12Q99456 494 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 GORASP1Q9BQQ3 440 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 NUSAP1Q9BXS6 441 aaKnown RBP9.07□□□□□ -0.96
CIRBP-218ENST00000588344 RAB17Q9H0T7 212 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 MIR1-1HGQ9H1L0 117 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 XAB2Q9HCS7 855 aaKnown RBP9.07□□□□□ -0.96
CIRBP-218ENST00000588344 CASS4Q9NQ75 786 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 NCDNQ9UBB6 729 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 SLC6A14Q9UN76 642 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 ITM2BQ9Y287 266 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 UTP11Q9Y3A2 253 aaKnown RBP9.07□□□□□ -0.96
CIRBP-218ENST00000588344 CACNA1IQ9P0X4 2223 aa9.07□□□□□ -0.96
CIRBP-218ENST00000588344 NYNRINQ9P2P1 1898 aaKnown RBP9.06□□□□□ -0.96
CIRBP-218ENST00000588344 MYO18AQ92614 2054 aaKnown RBP9.06□□□□□ -0.96
CIRBP-218ENST00000588344 HEATR9A2RTY3 570 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 A8MX80 341 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 F5H423 210 aaPredicted RBP9.06□□□□□ -0.96
CIRBP-218ENST00000588344 TLR4O00206 839 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 KHNYNO15037 678 aaKnown RBP9.06□□□□□ -0.96
CIRBP-218ENST00000588344 CLDN7O95471 211 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 PRKCGP05129 697 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 SYPP08247 313 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 TSHRP16473 764 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 LPOP22079 712 aaPredicted RBP9.06□□□□□ -0.96
CIRBP-218ENST00000588344 LHCGRP22888 699 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 KELP23276 732 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 ADRA1DP25100 572 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 HTR1BP28222 390 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 MPLP40238 635 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 DRG2P55039 364 aaKnown RBP9.06□□□□□ -0.96
CIRBP-218ENST00000588344 C21orf59P57076 290 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 DCDC1P59894 354 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 MTM1Q13496 603 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 PTK2BQ14289 1009 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 MORF4L2Q15014 288 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 TRIP13Q15645 432 aaPredicted RBP9.06□□□□□ -0.96
CIRBP-218ENST00000588344 SKIDA1Q1XH10 827 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 WSCD2Q2TBF2 565 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 LRRC73Q5JTD7 316 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 PLA2G2CQ5R387 149 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 FAXCQ5TGI0 409 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 ESRP1Q6NXG1 681 aaKnown RBP9.06□□□□□ -0.96
CIRBP-218ENST00000588344 SLC23A3Q6PIS1 610 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 IL27RAQ6UWB1 636 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 KYAT3Q6YP21 454 aaKnown RBP9.06□□□□□ -0.96
CIRBP-218ENST00000588344 ARMCX6Q7L4S7 300 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 GLT6D1Q7Z4J2 308 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 HSD11B1LQ7Z5J1 315 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 ABI3BPQ7Z7G0 1075 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 TSPAN33Q86UF1 283 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 JAMLQ86YT9 394 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 TMEM145Q8NBT3 493 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 BLOC1S5Q8TDH9 187 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 PTCD2Q8WV60 388 aaKnown RBP9.06□□□□□ -0.96
CIRBP-218ENST00000588344 NUS1Q96E22 293 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 DTD2Q96FN9 168 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 KLHDC7BQ96G42 594 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 PLEKHG4BQ96PX9 1271 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 RANBP9Q96S59 729 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 ORAI3Q9BRQ5 295 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 ERP44Q9BS26 406 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 IL22Q9GZX6 179 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 ARRDC1-AS1Q9H2J1 176 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 FAM83DQ9H4H8 585 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 TM9SF3Q9HD45 589 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 AASDHPPTQ9NRN7 309 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 BFARQ9NZS9 450 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 NFKBIL1Q9UBC1 381 aaPredicted RBP9.06□□□□□ -0.96
CIRBP-218ENST00000588344 GGT7Q9UJ14 662 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 APPL1Q9UKG1 709 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 RIMKLBQ9ULI2 386 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 ZNF711Q9Y462 761 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 KMT2EQ8IZD2 1858 aa9.06□□□□□ -0.96
CIRBP-218ENST00000588344 ZNF318Q5VUA4 2279 aa9.05□□□□□ -0.96
CIRBP-218ENST00000588344 A0A1W2PR77 199 aa9.05□□□□□ -0.96
CIRBP-218ENST00000588344 SDR42E2A6NKP2 422 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms