RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 TXNDC11Q6PKC3 985 aa20.47■□□□□ 0.87
ATG4D-204ENST00000586417 KYAT3Q6YP21 454 aaKnown RBP20.47■□□□□ 0.87
ATG4D-204ENST00000586417 GLT6D1Q7Z4J2 308 aa20.47■□□□□ 0.87
ATG4D-204ENST00000586417 PTAR1Q7Z6K3 402 aaPredicted RBP20.47■□□□□ 0.87
ATG4D-204ENST00000586417 CLEC14AQ86T13 490 aa20.47■□□□□ 0.87
ATG4D-204ENST00000586417 CILP2Q8IUL8 1156 aa20.47■□□□□ 0.87
ATG4D-204ENST00000586417 PHTF2Q8N3S3 785 aa20.47■□□□□ 0.87
ATG4D-204ENST00000586417 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.47■□□□□ 0.87
ATG4D-204ENST00000586417 PDCD6IPQ8WUM4 868 aaKnown RBP20.47■□□□□ 0.87
ATG4D-204ENST00000586417 TNKS2Q9H2K2 1166 aa20.47■□□□□ 0.87
ATG4D-204ENST00000586417 SUDS3Q9H7L9 328 aaPredicted RBP20.47■□□□□ 0.87
ATG4D-204ENST00000586417 SLCO1B3Q9NPD5 702 aa20.47■□□□□ 0.87
ATG4D-204ENST00000586417 FBXO6Q9NRD1 293 aaPredicted RBP20.47■□□□□ 0.87
ATG4D-204ENST00000586417 NLE1Q9NVX2 485 aaPredicted RBP20.47■□□□□ 0.87
ATG4D-204ENST00000586417 MARCH4Q9P2E8 410 aaPredicted RBP20.47■□□□□ 0.87
ATG4D-204ENST00000586417 DEC1Q9P2X7 70 aa20.47■□□□□ 0.87
ATG4D-204ENST00000586417 DCDC2Q9UHG0 476 aa20.47■□□□□ 0.87
ATG4D-204ENST00000586417 SLC39A10Q9ULF5 831 aa20.47■□□□□ 0.87
ATG4D-204ENST00000586417 A0A096LPK6 155 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 ANTXRLA6NF34 631 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 TRAFD1O14545 582 aaPredicted RBP20.46■□□□□ 0.87
ATG4D-204ENST00000586417 PGLSO95336 258 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 GSRP00390 522 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 MPOP05164 745 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 C2P06681 752 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 MAPK8P45983 427 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 LEPRP48357 1165 aaKnown RBP20.46■□□□□ 0.87
ATG4D-204ENST00000586417 TMPRSS15P98073 1019 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 PTPRRQ15256 657 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 ZNF789Q5FWF6 425 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 N4BP2L1Q5TBK1 243 aaPredicted RBP20.46■□□□□ 0.87
ATG4D-204ENST00000586417 C16orf46Q6P387 395 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 FAM47EQ6ZV65 393 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 CAMK1DQ8IU85 385 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 LMNTD2Q8IXW0 634 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 OR2AP1Q8NGE2 309 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 OR6P1Q8NGX9 317 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 ISG20Q96AZ6 181 aaKnown RBP20.46■□□□□ 0.87
ATG4D-204ENST00000586417 CABS1Q96KC9 395 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 ASB2Q96Q27 587 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 ELAC2Q9BQ52 826 aaKnown RBP20.46■□□□□ 0.87
ATG4D-204ENST00000586417 SLC27A6Q9Y2P4 619 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 PCDHB9Q9Y5E1 797 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.46■□□□□ 0.87
ATG4D-204ENST00000586417 CCDC162PA2VCL2 907 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 C19orf67A6NJJ6 358 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 PRRT4C9JH25 899 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 HTRA2O43464 458 aaPredicted RBP20.46■□□□□ 0.87
ATG4D-204ENST00000586417 SNX3O60493 162 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 PLIN3O60664 434 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 IGSF6O95976 241 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 GOT2P00505 430 aaKnown RBP20.46■□□□□ 0.87
ATG4D-204ENST00000586417 POLD2P49005 469 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 HNRNPH2P55795 449 aaKnown RBP20.46■□□□□ 0.87
ATG4D-204ENST00000586417 DMC1Q14565 340 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 CNSTQ6PJW8 725 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 PLD6Q8N2A8 252 aaKnown RBP20.46■□□□□ 0.87
ATG4D-204ENST00000586417 TTC30BQ8N4P2 665 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 PNPLA1Q8N8W4 532 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 PIH1D2Q8WWB5 315 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 SORCS1Q8WY21 1168 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 MYO19Q96H55 970 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 MANSC1Q9H8J5 431 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 TRPV5Q9NQA5 729 aa20.46■□□□□ 0.87
ATG4D-204ENST00000586417 FAM95CA0A1B0GW59 222 aa20.45■□□□□ 0.86
ATG4D-204ENST00000586417 EBAG9O00559 213 aa20.45■□□□□ 0.86
ATG4D-204ENST00000586417 EDF1O60869 148 aaKnown RBP20.45■□□□□ 0.86
ATG4D-204ENST00000586417 PIGNO95427 931 aa20.45■□□□□ 0.86
ATG4D-204ENST00000586417 GSTA1P08263 222 aa20.45■□□□□ 0.86
ATG4D-204ENST00000586417 SRFP11831 508 aa20.45■□□□□ 0.86
ATG4D-204ENST00000586417 GKP32189 559 aa20.45■□□□□ 0.86
ATG4D-204ENST00000586417 GRIA4P48058 902 aa20.45■□□□□ 0.86
ATG4D-204ENST00000586417 IRF9Q00978 393 aa20.45■□□□□ 0.86
ATG4D-204ENST00000586417 ARMC12Q5T9G4 340 aa20.45■□□□□ 0.86
ATG4D-204ENST00000586417 GRAMD4Q6IC98 578 aa20.45■□□□□ 0.86
ATG4D-204ENST00000586417 C22orf39Q6P5X5 142 aa20.45■□□□□ 0.86
ATG4D-204ENST00000586417 SLC41A1Q8IVJ1 513 aa20.45■□□□□ 0.86
ATG4D-204ENST00000586417 CACNA2D3Q8IZS8 1091 aa20.45■□□□□ 0.86
ATG4D-204ENST00000586417 GPR150Q8NGU9 434 aa20.45■□□□□ 0.86
ATG4D-204ENST00000586417 GABPB2Q8TAK5 448 aaPredicted RBP20.45■□□□□ 0.86
ATG4D-204ENST00000586417 CDKN2AIPNLQ96HQ2 116 aa20.45■□□□□ 0.86
ATG4D-204ENST00000586417 MECRQ9BV79 373 aa20.45■□□□□ 0.86
ATG4D-204ENST00000586417 ZNF358Q9NW07 568 aa20.45■□□□□ 0.86
ATG4D-204ENST00000586417 TMEM216Q9P0N5 145 aa20.45■□□□□ 0.86
ATG4D-204ENST00000586417 SIRPGQ9P1W8 387 aa20.45■□□□□ 0.86
ATG4D-204ENST00000586417 PIAS3Q9Y6X2 628 aa20.45■□□□□ 0.86
ATG4D-204ENST00000586417 SPECC1L-ADORA2AF8WAN1 911 aa20.44■□□□□ 0.86
ATG4D-204ENST00000586417 SOCS5O75159 536 aa20.44■□□□□ 0.86
ATG4D-204ENST00000586417 S1PR4O95977 384 aa20.44■□□□□ 0.86
ATG4D-204ENST00000586417 PROCP04070 461 aa20.44■□□□□ 0.86
ATG4D-204ENST00000586417 CTHP32929 405 aa20.44■□□□□ 0.86
ATG4D-204ENST00000586417 ABL2P42684 1182 aa20.44■□□□□ 0.86
ATG4D-204ENST00000586417 GALK1P51570 392 aa20.44■□□□□ 0.86
ATG4D-204ENST00000586417 PGGT1BP53609 377 aa20.44■□□□□ 0.86
ATG4D-204ENST00000586417 BCL2L1Q07817 233 aa20.44■□□□□ 0.86
ATG4D-204ENST00000586417 USP10Q14694 798 aaKnown RBP20.44■□□□□ 0.86
ATG4D-204ENST00000586417 MBLAC2Q68D91 279 aa20.44■□□□□ 0.86
ATG4D-204ENST00000586417 OR4K2Q8NGD2 314 aa20.44■□□□□ 0.86
ATG4D-204ENST00000586417 PITPNM3Q9BZ71 974 aa20.44■□□□□ 0.86
ATG4D-204ENST00000586417 SLC25A13Q9UJS0 675 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms