RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.31□□□□□ -0.6
TOP3A-217ENST00000584582 FNDC5Q8NAU1 212 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 KCNN1Q92952 543 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 HGH1Q9BTY7 390 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 ASB8Q9H765 288 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 ZNF839A8K0R7 811 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 GSTA4O15217 222 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 OR1I1O60431 355 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 XRCC1P18887 633 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-217ENST00000584582 ME2P23368 584 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 CCNFP41002 786 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 HCAR3P49019 387 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 NRG1Q02297 640 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-217ENST00000584582 PLOD1Q02809 727 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-217ENST00000584582 ELAVL2Q12926 359 aaKnown RBP11.31□□□□□ -0.6
TOP3A-217ENST00000584582 STX5Q13190 355 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 TRIP4Q15650 581 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-217ENST00000584582 PM20D1Q6GTS8 502 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 DDX53Q86TM3 631 aaKnown RBP11.31□□□□□ -0.6
TOP3A-217ENST00000584582 CPNE9Q8IYJ1 553 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 ST13P4Q8IZP2 240 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-217ENST00000584582 SIDT2Q8NBJ9 832 aaKnown RBP11.31□□□□□ -0.6
TOP3A-217ENST00000584582 METTL6Q8TCB7 284 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 CAAP1Q9H8G2 361 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 EBF2Q9HAK2 575 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 ZFP14Q9HCL3 533 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.31□□□□□ -0.6
TOP3A-217ENST00000584582 WWOXQ9NZC7 414 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 ANKRD6Q9Y2G4 727 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 FAM149AA5PLN7 773 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 PRR23AA6NEV1 266 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 K7ERQ8 282 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 EOMESO95936 686 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 HSPA8P11142 646 aaKnown RBP11.31□□□□□ -0.6
TOP3A-217ENST00000584582 PSMC3P17980 439 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 CLCN5P51795 746 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 SLC7A2P52569 658 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 EPHB3P54753 998 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.31□□□□□ -0.6
TOP3A-217ENST00000584582 TRIML2Q8N7C3 387 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 ZNF366Q8N895 744 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 NT5C3BQ969T7 300 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 LINGO1Q96FE5 620 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 CNDP1Q96KN2 507 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 SORT1Q99523 831 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 EFHD1Q9BUP0 239 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 KIFC1Q9BW19 673 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 ADGRE3Q9BY15 652 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 TRIM4Q9C037 500 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 UNC93B1Q9H1C4 597 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 DPPA5A6NC42 116 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 OR6C75A6NL08 312 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 A8MT66 165 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 CDC7O00311 574 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 KLF11O14901 512 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 INPP4BO15327 924 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 GALTP07902 379 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 ITGAXP20702 1163 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 NFKBIAP25963 317 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 GRIA3P42263 894 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 PSME3P61289 254 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 SCAPQ12770 1279 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 NFYCQ13952 458 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 STEAP4Q687X5 459 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 ANKS6Q68DC2 871 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 CLHC1Q8NHS4 586 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 MYLIPQ8WY64 445 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 Q9H521 79 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 CD84Q9UIB8 345 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 LRCH1Q9Y2L9 728 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 G3V2L1 256 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 H3BMM5 538 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 ALDH1A2O94788 518 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 MAGEA3P43357 314 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 CDKN2DP55273 166 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 IKBKEQ14164 716 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 MBTPS1Q14703 1052 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 CTC1Q2NKJ3 1217 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 XKR4Q5GH76 650 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 RAB41Q5JT25 222 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 RSPO2Q6UXX9 243 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-217ENST00000584582 NET1Q7Z628 596 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-217ENST00000584582 CENPLQ8N0S6 344 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-217ENST00000584582 ZNF276Q8N554 614 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 GFM2Q969S9 779 aaKnown RBP11.3□□□□□ -0.6
TOP3A-217ENST00000584582 VPS33AQ96AX1 596 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 MYEOVQ96EZ4 313 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 TSPAN18Q96SJ8 248 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 KLHL4Q9C0H6 718 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 LNPEPQ9UIQ6 1025 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 SCML2Q9UQR0 700 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 CPQQ9Y646 472 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 ARVCFO00192 962 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 SYNCRIPO60506 623 aaKnown RBP11.3□□□□□ -0.6
TOP3A-217ENST00000584582 ATP6V1C1P21283 382 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 PSEN1P49768 467 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 ZNF135P52742 658 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-217ENST00000584582 TIFABQ6ZNK6 161 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 DHDDSQ86SQ9 333 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 RBM23Q86U06 439 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms