RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 KHDC1Q4VXA5 237 aaKnown RBP13.06□□□□□ -0.32
RNF43-208ENST00000584437 CITED4Q96RK1 184 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 LGMNQ99538 433 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 CHST10O43529 356 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 MTA2O94776 668 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 IPO13O94829 963 aaKnown RBP13.06□□□□□ -0.32
RNF43-208ENST00000584437 CALCAP01258 141 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 PAX3P23760 479 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 MATKP42679 507 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 PRKAG1P54619 331 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 TAF13Q15543 124 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 SCIMPQ6UWF3 145 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 IRF2BP1Q8IU81 584 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 B3GALT6Q96L58 329 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 CADM1Q9BY67 442 aaKnown RBP13.06□□□□□ -0.32
RNF43-208ENST00000584437 LHX5Q9H2C1 402 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 SNX7Q9UNH6 387 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 COQ6Q9Y2Z9 468 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 ANGPTL1O95841 491 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 NUDT14O95848 222 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 HLA-DQA2P01906 255 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 SGCGQ13326 291 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 HGSNATQ68CP4 663 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 ZNF655Q8N720 491 aaPredicted RBP13.06□□□□□ -0.32
RNF43-208ENST00000584437 ARL10Q8N8L6 244 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 RAB2BQ8WUD1 216 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 DNAJB3Q8WWF6 145 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 PIK3R3Q92569 461 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 HAVCR1Q96D42 359 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 YME1L1Q96TA2 773 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 RCOR3Q9P2K3 495 aaPredicted RBP13.06□□□□□ -0.32
RNF43-208ENST00000584437 DPP7Q9UHL4 492 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 GPC6Q9Y625 555 aaPredicted RBP13.06□□□□□ -0.32
RNF43-208ENST00000584437 CASZ1Q86V15 1759 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 CEP152O94986 1710 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 AGPSO00116 658 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 RECQL4O94761 1208 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 LPOP22079 712 aaPredicted RBP13.06□□□□□ -0.32
RNF43-208ENST00000584437 PPP1R15BQ5SWA1 713 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 MKL1Q969V6 931 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 MFSD14AQ96MC6 490 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 PCDH18Q9HCL0 1135 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 MCUBQ9NWR8 336 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 TPD52L2O43399 206 aaKnown RBP13.05□□□□□ -0.32
RNF43-208ENST00000584437 PSIP1O75475 530 aaKnown RBP13.05□□□□□ -0.32
RNF43-208ENST00000584437 ENO2P09104 434 aaPredicted RBP13.05□□□□□ -0.32
RNF43-208ENST00000584437 METTL3Q86U44 580 aaKnown RBP13.05□□□□□ -0.32
RNF43-208ENST00000584437 PIGZQ86VD9 579 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 OR4L1Q8NH43 312 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 ROPN1LQ96C74 230 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 C1GALT1C1Q96EU7 318 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 IDI2Q9BXS1 227 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 SPG21Q9NZD8 308 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 POLR3HQ9Y535 204 aaPredicted RBP13.05□□□□□ -0.32
RNF43-208ENST00000584437 RNF225M0QZC1 329 aaPredicted RBP13.05□□□□□ -0.32
RNF43-208ENST00000584437 SEMA3DO95025 777 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 FTH1P02794 183 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 PSEN1P49768 467 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 PCBP1Q15365 356 aaKnown RBP eCLIP13.05□□□□□ -0.324e-6■■■■■ 41.5
RNF43-208ENST00000584437 PARP8Q8N3A8 854 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 PTCD2Q8WV60 388 aaKnown RBP13.05□□□□□ -0.32
RNF43-208ENST00000584437 NODALQ96S42 347 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 SEMA3CQ99985 751 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 MSX2P35548 267 aaPredicted RBP13.05□□□□□ -0.32
RNF43-208ENST00000584437 POLR2JP52435 117 aaKnown RBP13.05□□□□□ -0.32
RNF43-208ENST00000584437 SLC39A12Q504Y0 691 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 GPAT3Q53EU6 434 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 RASSF6Q6ZTQ3 369 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 TAF8Q7Z7C8 310 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 SVOPLQ8N434 492 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 CBR4Q8N4T8 237 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 BSNDQ8WZ55 320 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 P2RY11Q96G91 374 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 NXF3Q9H4D5 531 aaKnown RBP13.05□□□□□ -0.32
RNF43-208ENST00000584437 C5orf60A6NFR6 353 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 SLC22A2O15244 555 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 TGFB1I1O43294 461 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 CCNYL3P0C7X3 344 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 OGNP20774 298 aaKnown RBP13.05□□□□□ -0.32
RNF43-208ENST00000584437 PEX2P28328 305 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 SEPHS1P49903 392 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 ARPC4P59998 168 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 FBXO42Q6P3S6 717 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 TRAPPC5Q8IUR0 188 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 CHCHD6Q9BRQ6 235 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 DGKBQ9Y6T7 804 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 EME2A4GXA9 379 aaPredicted RBP13.05□□□□□ -0.32
RNF43-208ENST00000584437 STX16-NPEPL1H3BU86 382 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 STX16O14662 325 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 MPZL2O60487 215 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 XKR6Q5GH73 641 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 LCN1P1Q5VSP4 162 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 TMPRSS11AQ6ZMR5 421 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 PJA1Q8NG27 643 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 LINGO1Q96FE5 620 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 PHF12Q96QT6 1004 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 C1QTNF1Q9BXJ1 281 aa13.05□□□□□ -0.32
RNF43-208ENST00000584437 ATP5C1P36542 298 aaKnown RBP13.04□□□□□ -0.32
RNF43-208ENST00000584437 CCR4P51679 360 aa13.04□□□□□ -0.32
RNF43-208ENST00000584437 ADAM17P78536 824 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms