RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 RAB15P59190 212 aa12.32□□□□□ -0.44
TOP3A-215ENST00000583328 MC1RQ01726 317 aa12.32□□□□□ -0.44
TOP3A-215ENST00000583328 CDC20Q12834 499 aa12.32□□□□□ -0.44
TOP3A-215ENST00000583328 KLRB1Q12918 225 aa12.32□□□□□ -0.44
TOP3A-215ENST00000583328 MAN2A1Q16706 1144 aa12.32□□□□□ -0.44
TOP3A-215ENST00000583328 TCP11X2Q5H9J9 407 aa12.32□□□□□ -0.44
TOP3A-215ENST00000583328 NAA35Q5VZE5 725 aa12.32□□□□□ -0.44
TOP3A-215ENST00000583328 ANKS6Q68DC2 871 aa12.32□□□□□ -0.44
TOP3A-215ENST00000583328 PNCKQ6P2M8 343 aa12.32□□□□□ -0.44
TOP3A-215ENST00000583328 LIPIQ6XZB0 460 aa12.32□□□□□ -0.44
TOP3A-215ENST00000583328 ZSWIM9Q86XI8 627 aa12.32□□□□□ -0.44
TOP3A-215ENST00000583328 NRROSQ86YC3 692 aa12.32□□□□□ -0.44
TOP3A-215ENST00000583328 NLGN4XQ8N0W4 816 aa12.32□□□□□ -0.44
TOP3A-215ENST00000583328 CCDC185Q8N715 623 aa12.32□□□□□ -0.44
TOP3A-215ENST00000583328 RTL3Q8N8U3 475 aaKnown RBP12.32□□□□□ -0.44
TOP3A-215ENST00000583328 NLGN4YQ8NFZ3 816 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-215ENST00000583328 TUBGCP5Q96RT8 1024 aa12.32□□□□□ -0.44
TOP3A-215ENST00000583328 DPYSL5Q9BPU6 564 aa12.32□□□□□ -0.44
TOP3A-215ENST00000583328 ZMYND15Q9H091 742 aa12.32□□□□□ -0.44
TOP3A-215ENST00000583328 FANCLQ9NW38 375 aa12.32□□□□□ -0.44
TOP3A-215ENST00000583328 PILRAQ9UKJ1 303 aa12.32□□□□□ -0.44
TOP3A-215ENST00000583328 DOCK4Q8N1I0 1966 aa12.32□□□□□ -0.44
TOP3A-215ENST00000583328 SDK2Q58EX2 2172 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 LOC101059948A0A1B0GTJ6 334 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 PPM1DO15297 605 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 THRAP10827 490 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 AK4P27144 223 aaPredicted RBP12.31□□□□□ -0.44
TOP3A-215ENST00000583328 GNPDA1P46926 289 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 RALGDSQ12967 914 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 IQCB1Q15051 598 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 ACOX1Q15067 660 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 PARP15Q460N3 678 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 HSP90AA4PQ58FG1 418 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 C16orf46Q6P387 395 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 SLC30A9Q6PML9 568 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 STRADAQ7RTN6 431 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 KDELC2Q7Z4H8 507 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 SLFN11Q7Z7L1 901 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 UNC5BQ8IZJ1 945 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 PYROXD2Q8N2H3 581 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 TEX19Q8NA77 164 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 ANKRD20A12PQ8NF67 263 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 PATE1Q8WXA2 126 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 TEFMQ96QE5 360 aaKnown RBP12.31□□□□□ -0.44
TOP3A-215ENST00000583328 TSPY26PQ9H489 355 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 ATP13A3Q9H7F0 1226 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 CBX8Q9HC52 389 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 KCNK4Q9NYG8 393 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 TMEM9Q9P0T7 183 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 PLEKHB1Q9UF11 243 aaPredicted RBP12.31□□□□□ -0.44
TOP3A-215ENST00000583328 USP9XQ93008 2570 aaPredicted RBP12.31□□□□□ -0.44
TOP3A-215ENST00000583328 TEX15Q9BXT5 2789 aa12.31□□□□□ -0.44
TOP3A-215ENST00000583328 IGHV1OR21-1A0A087WYE8 117 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 C2CD4BA6NLJ0 364 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 A8MX80 341 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 CREB3O43889 395 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 MMEP08473 750 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 KRT7P08729 469 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 MYCLP1P12525 358 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-215ENST00000583328 PRKCSHP14314 528 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-215ENST00000583328 TCN2P20062 427 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 SERPINA4P29622 427 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 OAS2P29728 719 aaKnown RBP12.3□□□□□ -0.44
TOP3A-215ENST00000583328 MAN1A1P33908 653 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 CD97P48960 835 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 MLLT10P55197 1068 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 HDAC4P56524 1084 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 POLR2LP62875 67 aaKnown RBP12.3□□□□□ -0.44
TOP3A-215ENST00000583328 NOMO3P69849 1222 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 SQSTM1Q13501 440 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 PEX6Q13608 980 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 SNAP47Q5SQN1 464 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 AFMIDQ63HM1 303 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 TMEM71Q6P5X7 295 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 SRLQ86TD4 932 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 NOP9Q86U38 636 aaKnown RBP12.3□□□□□ -0.44
TOP3A-215ENST00000583328 NAGSQ8N159 534 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 PELI3Q8N2H9 469 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 JOSD2Q8TAC2 188 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 FAM172AQ8WUF8 416 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 NTAN1Q96AB6 310 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 RTP4Q96DX8 246 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 AHCYL2Q96HN2 611 aaKnown RBP12.3□□□□□ -0.44
TOP3A-215ENST00000583328 CTRCQ99895 268 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 TUBGCP2Q9BSJ2 902 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 HSD3B7Q9H2F3 369 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 CATSPERBQ9H7T0 1116 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 PHPT1Q9NRX4 125 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-215ENST00000583328 TRNAU1APQ9NX07 287 aaKnown RBP12.3□□□□□ -0.44
TOP3A-215ENST00000583328 TP53TG5Q9Y2B4 290 aa12.3□□□□□ -0.44
TOP3A-215ENST00000583328 RELNP78509 3460 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 A8MU76 341 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 J3KR12 359 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 AGFG2O95081 481 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 FUCA1P04066 466 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 CEACAM5P06731 702 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 TPM2P07951 284 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 CDK11BP21127 795 aaKnown RBP12.29□□□□□ -0.44
TOP3A-215ENST00000583328 CSF2RBP32927 897 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 PTPN9P43378 593 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms