RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 S1PR4O95977 384 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 PENKP01210 267 aaPredicted RBP13.7□□□□□ -0.22
SRSF1-205ENST00000582730 FGF1P05230 155 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 HLA-DPA1P20036 260 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 PPARGP37231 505 aaPredicted RBP13.7□□□□□ -0.22
SRSF1-205ENST00000582730 INHBCP55103 352 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 PLD1Q13393 1074 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 MSLNQ13421 630 aaPredicted RBP13.7□□□□□ -0.22
SRSF1-205ENST00000582730 MED21Q13503 144 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 RNF111Q6ZNA4 994 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 LRRC43Q8N309 656 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 BHMTQ93088 406 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 CHCHD3Q9NX63 227 aaKnown RBP13.7□□□□□ -0.22
SRSF1-205ENST00000582730 GALNT8Q9NY28 637 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 TMCO1Q9UM00 188 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 CD3EAPO15446 510 aaKnown RBP13.69□□□□□ -0.22
SRSF1-205ENST00000582730 FKBP6O75344 327 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 IPO13O94829 963 aaKnown RBP13.69□□□□□ -0.22
SRSF1-205ENST00000582730 SUPT7LO94864 414 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 RHOCP08134 193 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 RBP1P09455 135 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 THRAP10827 490 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 ENO3P13929 434 aaPredicted RBP13.69□□□□□ -0.22
SRSF1-205ENST00000582730 CORO1AP31146 461 aaKnown RBP13.69□□□□□ -0.22
SRSF1-205ENST00000582730 HECTD3Q5T447 861 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 LPCAT4Q643R3 524 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 SATL1Q86VE3 508 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 KDM1BQ8NB78 822 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 SLAIN1Q8ND83 568 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 NMD3Q96D46 503 aaKnown RBP13.69□□□□□ -0.22
SRSF1-205ENST00000582730 FEM1CQ96JP0 617 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 SMIM14Q96QK8 99 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 S100A14Q9HCY8 104 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 COCHO43405 550 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 RGRP47804 291 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 SGSHP51688 502 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 SMARCB1Q12824 385 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 CYLC2Q14093 348 aaPredicted RBP13.69□□□□□ -0.22
SRSF1-205ENST00000582730 MYBPC3Q14896 1274 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 GEN1Q17RS7 908 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 MRNIPQ6NTE8 343 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 DHDDSQ86SQ9 333 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 ACTRT2Q8TDY3 377 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 FATE1Q969F0 183 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 RCN3Q96D15 328 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 MUC3BQ9H195 1237 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 ZDHHC7Q9NXF8 308 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 SEPT3Q9UH03 358 aa13.69□□□□□ -0.22
SRSF1-205ENST00000582730 TBC1D4O60343 1298 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 NPHS1O60500 1241 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 ZDHHC11BP0C7U3 371 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 DNAJB1P25685 340 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 HOXD9P28356 352 aaPredicted RBP13.68□□□□□ -0.22
SRSF1-205ENST00000582730 ATXN3P54252 364 aaPredicted RBP13.68□□□□□ -0.22
SRSF1-205ENST00000582730 USP41Q3LFD5 358 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 TMEM207Q6UWW9 146 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 TRIM74Q86UV6 250 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 TRIM73Q86UV7 250 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 RNF148Q8N7C7 305 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 EFHBQ8N7U6 833 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 RTKNQ9BST9 563 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 CATSPERZQ9NTU4 200 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.68□□□□□ -0.22
SRSF1-205ENST00000582730 RGSL1A5PLK6 1076 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 RPP40O75818 363 aaKnown RBP13.68□□□□□ -0.22
SRSF1-205ENST00000582730 UQCRBP14927 111 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 TUFMP49411 452 aaKnown RBP13.68□□□□□ -0.22
SRSF1-205ENST00000582730 PFKPQ01813 784 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 ZNF177Q13360 481 aaPredicted RBP13.68□□□□□ -0.22
SRSF1-205ENST00000582730 SEMA3AQ14563 771 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 LINGO4Q6UY18 593 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.68□□□□□ -0.224e-10■■■■■ 56.8
SRSF1-205ENST00000582730 ADGRG6Q86SQ4 1221 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 CUZD1Q86UP6 607 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 LPCAT1Q8NF37 534 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 USP13Q92995 863 aaPredicted RBP13.68□□□□□ -0.22
SRSF1-205ENST00000582730 PRICKLE1Q96MT3 831 aaPredicted RBP13.68□□□□□ -0.22
SRSF1-205ENST00000582730 CYP2S1Q96SQ9 504 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 HIPK3Q9H422 1215 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 PDFQ9HBH1 243 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 POMPQ9Y244 141 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 SH3BP1Q9Y3L3 701 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 ZNF840PA6NDX5 716 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 TRPC5OSA6NMA1 111 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 VCLP18206 1134 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 PRDX6P30041 224 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 MSX2P35548 267 aaPredicted RBP13.68□□□□□ -0.22
SRSF1-205ENST00000582730 HK2P52789 917 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 AQP4P55087 323 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 CDH13P55290 713 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 SULT2A1Q06520 285 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 PDAP1Q13442 181 aaKnown RBP13.68□□□□□ -0.22
SRSF1-205ENST00000582730 ART3Q13508 389 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 ACAP2Q15057 778 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 FAM45BPQ6NSW5 357 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 AFAP1L2Q8N4X5 818 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 KLHL23Q8NBE8 558 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 OR4L1Q8NH43 312 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 FAM45AQ8TCE6 357 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 BRSK1Q8TDC3 778 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms