RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 MFN1Q8IWA4 741 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 MAB21L3Q8N8X9 362 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 LPCAT1Q8NF37 534 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 OR13C4Q8NGS5 318 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 MAGEC3Q8TD91 643 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 CDKN2AIPNLQ96HQ2 116 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 IGSF5Q9NSI5 407 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 MARCH4Q9P2E8 410 aaPredicted RBP22.68■■□□□ 1.22
CCDC47-204ENST00000582252 TAGLN3Q9UI15 199 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 HCFC2Q9Y5Z7 792 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 PER2O15055 1255 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 GYG2O15488 501 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 WFS1O76024 890 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 HNRNPA1P09651 372 aaKnown RBP eCLIP22.68■■□□□ 1.22
CCDC47-204ENST00000582252 PSMA3P25788 255 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 MZF1P28698 734 aaPredicted RBP22.68■■□□□ 1.22
CCDC47-204ENST00000582252 SLC8A1P32418 973 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 CSKP41240 450 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 IDH3AP50213 366 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 DLG1Q12959 904 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 TECRLQ5HYJ1 363 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 GAREM2Q75VX8 874 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 PIWIL4Q7Z3Z4 852 aaKnown RBP22.68■■□□□ 1.22
CCDC47-204ENST00000582252 ARHGAP24Q8N264 748 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 ZNF781Q8N8C0 355 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 DDI1Q8WTU0 396 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 STON2Q8WXE9 905 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 PPP2R3CQ969Q6 453 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 TCF12Q99081 682 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 CCDC106Q9BWC9 280 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 ASAH2Q9NR71 780 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 NCKIPSDQ9NZQ3 722 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 LHX3Q9UBR4 397 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 VTI1BQ9UEU0 232 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.68■■□□□ 1.22
CCDC47-204ENST00000582252 OR51B4Q9Y5P0 310 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 OR51F1A6NGY5 319 aa22.67■■□□□ 1.22
CCDC47-204ENST00000582252 EPOPA6NHQ4 379 aa22.67■■□□□ 1.22
CCDC47-204ENST00000582252 F8W8V4 182 aa22.67■■□□□ 1.22
CCDC47-204ENST00000582252 CCL22O00626 93 aa22.67■■□□□ 1.22
CCDC47-204ENST00000582252 CCL16O15467 120 aa22.67■■□□□ 1.22
CCDC47-204ENST00000582252 DLX3O60479 287 aa22.67■■□□□ 1.22
CCDC47-204ENST00000582252 SNAP91O60641 907 aa22.67■■□□□ 1.22
CCDC47-204ENST00000582252 FGF19O95750 216 aa22.67■■□□□ 1.22
CCDC47-204ENST00000582252 PIRTP0C851 137 aa22.67■■□□□ 1.22
CCDC47-204ENST00000582252 CCDC166P0CW27 439 aa22.67■■□□□ 1.22
CCDC47-204ENST00000582252 LPOP22079 712 aaPredicted RBP22.67■■□□□ 1.22
CCDC47-204ENST00000582252 ARRB2P32121 409 aa22.67■■□□□ 1.22
CCDC47-204ENST00000582252 DUSP6Q16828 381 aa22.67■■□□□ 1.22
CCDC47-204ENST00000582252 TYSND1Q2T9J0 566 aa22.67■■□□□ 1.22
CCDC47-204ENST00000582252 FSCBQ5H9T9 825 aa22.67■■□□□ 1.22
CCDC47-204ENST00000582252 ADGRD2Q7Z7M1 963 aa22.67■■□□□ 1.22
CCDC47-204ENST00000582252 RBM23Q86U06 439 aaKnown RBP22.67■■□□□ 1.22
CCDC47-204ENST00000582252 SUGP1Q8IWZ8 645 aaKnown RBP22.67■■□□□ 1.22
CCDC47-204ENST00000582252 ACDQ96AP0 544 aa22.67■■□□□ 1.22
CCDC47-204ENST00000582252 PRR11Q96HE9 360 aaPredicted RBP22.67■■□□□ 1.22
CCDC47-204ENST00000582252 LRRC3Q9BY71 257 aa22.67■■□□□ 1.22
CCDC47-204ENST00000582252 ZDHHC7Q9NXF8 308 aa22.67■■□□□ 1.22
CCDC47-204ENST00000582252 ARMCX1Q9P291 453 aa22.67■■□□□ 1.22
CCDC47-204ENST00000582252 VPS51Q9UID3 782 aa22.67■■□□□ 1.22
CCDC47-204ENST00000582252 ANKRD66B4E2M5 251 aa22.66■■□□□ 1.22
CCDC47-204ENST00000582252 SPECC1L-ADORA2AF8WAN1 911 aa22.66■■□□□ 1.22
CCDC47-204ENST00000582252 CHUKO15111 745 aa22.66■■□□□ 1.22
CCDC47-204ENST00000582252 XYLBO75191 536 aa22.66■■□□□ 1.22
CCDC47-204ENST00000582252 RPL14P50914 215 aaKnown RBP22.66■■□□□ 1.22
CCDC47-204ENST00000582252 STC1P52823 247 aa22.66■■□□□ 1.22
CCDC47-204ENST00000582252 NAGLUP54802 743 aa22.66■■□□□ 1.22
CCDC47-204ENST00000582252 AP1S1P61966 158 aa22.66■■□□□ 1.22
CCDC47-204ENST00000582252 TUBB3Q13509 450 aa22.66■■□□□ 1.22
CCDC47-204ENST00000582252 LINGO4Q6UY18 593 aa22.66■■□□□ 1.22
CCDC47-204ENST00000582252 SLC22A9Q8IVM8 553 aa22.66■■□□□ 1.22
CCDC47-204ENST00000582252 MRPL38Q96DV4 380 aaKnown RBP22.66■■□□□ 1.22
CCDC47-204ENST00000582252 UBXN10Q96LJ8 280 aa22.66■■□□□ 1.22
CCDC47-204ENST00000582252 CDCA3Q99618 268 aaPredicted RBP22.66■■□□□ 1.22
CCDC47-204ENST00000582252 SUDS3Q9H7L9 328 aaPredicted RBP22.66■■□□□ 1.22
CCDC47-204ENST00000582252 CFAP97Q9P2B7 532 aa22.66■■□□□ 1.22
CCDC47-204ENST00000582252 SPO11Q9Y5K1 396 aa22.66■■□□□ 1.22
CCDC47-204ENST00000582252 HELZP42694 1942 aaKnown RBP22.66■■□□□ 1.22
CCDC47-204ENST00000582252 NOTCH4Q99466 2003 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 BUD23O43709 281 aaKnown RBP22.65■■□□□ 1.22
CCDC47-204ENST00000582252 DIAPH2O60879 1101 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 RFPL2O75678 378 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 CD160O95971 181 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 PRLP01236 227 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 POU2F2P09086 479 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 AOC1P19801 751 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 FDXRP22570 491 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 MAPK8P45983 427 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 PFKPQ01813 784 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 METTL21CQ5VZV1 264 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 EPGNQ6UW88 154 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 RNF135Q8IUD6 432 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 HS6ST3Q8IZP7 471 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 KIRREL3Q8IZU9 778 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 OR4K2Q8NGD2 314 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 UTP4Q969X6 686 aaKnown RBP22.65■■□□□ 1.22
CCDC47-204ENST00000582252 CCDC68Q9H2F9 335 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 COG4Q9H9E3 785 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 KIAA1522Q9P206 1035 aaPredicted RBP22.65■■□□□ 1.22
CCDC47-204ENST00000582252 PCDHGC4Q9Y5F7 938 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms