RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 ERGIC1Q969X5 290 aa3.33□□□□□ -1.88
SMCHD1-206ENST00000581631 ZC3HAV1LQ96H79 300 aaKnown RBP3.33□□□□□ -1.88
SMCHD1-206ENST00000581631 TMEM19Q96HH6 336 aa3.33□□□□□ -1.88
SMCHD1-206ENST00000581631 PYGO2Q9BRQ0 406 aa3.33□□□□□ -1.88
SMCHD1-206ENST00000581631 SNTG1Q9NSN8 517 aa3.33□□□□□ -1.88
SMCHD1-206ENST00000581631 BABAM1Q9NWV8 329 aa3.33□□□□□ -1.88
SMCHD1-206ENST00000581631 IL1RAPL1Q9NZN1 696 aa3.33□□□□□ -1.88
SMCHD1-206ENST00000581631 KCNS2Q9ULS6 477 aa3.33□□□□□ -1.88
SMCHD1-206ENST00000581631 NDUFS7O75251 213 aa3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 PTPN2P17706 415 aa3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 CNTFP26441 200 aa3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 PGM1P36871 562 aa3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 EFNB1P98172 346 aa3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 RELQ04864 619 aaPredicted RBP3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 CHRNDQ07001 517 aa3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 SLC20A2Q08357 652 aa3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 TAF12Q16514 161 aa3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 AMZ1Q400G9 498 aa3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 ATP13A5Q4VNC0 1218 aa3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 PAPPA-AS1Q5QFB9 102 aa3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 SLC22A25Q6T423 547 aa3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 SH2D6Q7Z4S9 175 aa3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 GPAT4Q86UL3 456 aa3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 LRRTM4Q86VH4 590 aa3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 ZC3HC1Q86WB0 502 aaKnown RBP3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 TNIP2Q8NFZ5 429 aa3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 ABCF3Q9NUQ8 709 aa3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 TAAR2Q9P1P5 351 aa3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 DGKBQ9Y6T7 804 aa3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 A3GALT2U3KPV4 340 aa3.32□□□□□ -1.88
SMCHD1-206ENST00000581631 A0A0U1RQF3 1178 aa3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 ASPDHA6ND91 283 aa3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 TIPRLO75663 272 aa3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 URODP06132 367 aa3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 PCNAP12004 261 aa3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 NR1H2P55055 460 aa3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 KRTAP10-8P60410 259 aa3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 PITX1P78337 314 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 SERTAD4-AS1Q5TG53 156 aa3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 FAM122CQ6P4D5 195 aa3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 TADA2BQ86TJ2 420 aa3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 NOXA1Q86UR1 476 aa3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 OTULINQ96BN8 352 aa3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 GCC1Q96CN9 775 aa3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 SCLT1Q96NL6 688 aa3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 SIN3AQ96ST3 1273 aa3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 MXRA8Q9BRK3 442 aa3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 DCTN5Q9BTE1 182 aa3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 HEMGNQ9BXL5 484 aa3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 CSTL1Q9H114 145 aa3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 CISD1Q9NZ45 108 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 KIAA1456Q9P272 454 aa3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 CNOT7Q9UIV1 285 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 PSAT1Q9Y617 370 aa3.31□□□□□ -1.88
SMCHD1-206ENST00000581631 PMS2P5A8MQ11 134 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 TEX22C9J3V5 150 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 KLK8O60259 260 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 ZIC3O60481 467 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 POLBP06746 335 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 GALTP07902 379 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 CDH1P12830 882 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 HSD3B1P14060 373 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 NR1D1P20393 614 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 ITGAXP20702 1163 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 POU1F1P28069 291 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 PSMC2P35998 433 aaKnown RBP3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 GPD2P43304 727 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 HSD17B4P51659 736 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 EFNA5P52803 228 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 CDH15P55291 814 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.3□□□□□ -1.882e-6■□□□□ 8.4
SMCHD1-206ENST00000581631 SREBF2Q12772 1141 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 GRIK3Q13003 919 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 ITGADQ13349 1161 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 VEPH1Q14D04 833 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 TAF11Q15544 211 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 LRRC8DQ7L1W4 858 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 NOTCH2NLQ7Z3S9 236 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 SLC24A4Q8NFF2 622 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 SNAPC3Q92966 411 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 ZNF524Q96C55 264 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 MAELQ96JY0 434 aaKnown RBP3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 UBXN10Q96LJ8 280 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 ZNF599Q96NL3 588 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 LBHD1Q9BQE6 289 aaPredicted RBP3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 GPR63Q9BZJ6 419 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 INTS2Q9H0H0 1204 aaKnown RBP3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 TMEM160Q9NX00 188 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 CDC14AQ9UNH5 594 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 CARD8Q9Y2G2 431 aa3.3□□□□□ -1.88
SMCHD1-206ENST00000581631 GOLGA6L10A0A0M3HER8 536 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 SOCS6O14544 535 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 BCAT2O15382 392 aaPredicted RBP3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 GUCY1B2O75343 617 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 TACC1O75410 805 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 MTA2O94776 668 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 NDUFB4O95168 129 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 PATE4P0C8F1 98 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 KRT9P35527 623 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 GGT5P36269 586 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms