RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 ASIC1P78348 528 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 MRPS5P82675 430 aaKnown RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 TFAP4Q01664 338 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 PRKCEQ02156 737 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 RNASELQ05823 741 aaKnown RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 TEFQ10587 303 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 NOGQ13253 232 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 HNRNPDQ14103 355 aaKnown RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 GNA13Q14344 377 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 TRIM71Q2Q1W2 868 aaKnown RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 CCDC157Q569K6 752 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 PPP6R3Q5H9R7 873 aaPredicted RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 AARS2Q5JTZ9 985 aaKnown RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 GLRA4Q5JXX5 417 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 DEPDC1Q5TB30 811 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 RNASEH2BQ5TBB1 312 aaKnown RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 PRAMEF17Q5VTA0 474 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 KLHDC7AQ5VTJ3 777 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 SHEQ5VZ18 495 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 CES4AQ5XG92 561 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 ADALQ6DHV7 355 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 THOC7Q6I9Y2 204 aaKnown RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 MIS18BP1Q6P0N0 1132 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 ANKRD16Q6P6B7 361 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 FBXO38Q6PIJ6 1188 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 TMEM108Q6UXF1 575 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 FAM83HQ6ZRV2 1179 aaPredicted RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 USP45Q70EL2 814 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 MAEAQ7L5Y9 396 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 CHST3Q7LGC8 479 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 MIER3Q7Z3K6 550 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 MAVSQ7Z434 540 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 RABEPKQ7Z6M1 372 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 USP37Q86T82 979 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 CAND1Q86VP6 1230 aaKnown RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 STX12Q86Y82 276 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 GRAMD2AQ8IUY3 354 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 WDR49Q8IV35 697 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 PSTKQ8IV42 348 aaKnown RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 UNC5CLQ8IV45 518 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 SCN4BQ8IWT1 228 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 ADSSL1Q8N142 457 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 ZNF321PQ8N8H1 164 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 MRPL43Q8N983 215 aaKnown RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 SMYD1Q8NB12 490 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 FANCBQ8NB91 859 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 LPCAT1Q8NF37 534 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 URGCPQ8TCY9 931 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 TRPC4APQ8TEL6 797 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 PRCCQ92733 491 aaPredicted RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 DDX17Q92841 729 aaKnown RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 KIFAP3Q92845 792 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 RILPL2Q969X0 211 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 RMDN1Q96DB5 314 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 THOC1Q96FV9 657 aaKnown RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 APIPQ96GX9 242 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 RBM17Q96I25 401 aaKnown RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 RAD9AQ99638 391 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 TMEM79Q9BSE2 394 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 HAUS8Q9BT25 410 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 COLEC11Q9BWP8 271 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 APOL6Q9BWW8 343 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 NUSAP1Q9BXS6 441 aaKnown RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 PUS3Q9BZE2 481 aaKnown RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 PRSS22Q9GZN4 317 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 ISCUQ9H1K1 167 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 RIBC2Q9H4K1 309 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 SYNDIG1Q9H7V2 258 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 KCNK13Q9HB14 408 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 ZNF287Q9HBT7 754 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 SARS2Q9NP81 518 aaKnown RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 SIRT3Q9NTG7 399 aaPredicted RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 AGPAT5Q9NUQ2 364 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 RAB20Q9NX57 234 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 DLL3Q9NYJ7 618 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 EHD2Q9NZN4 543 aa4.09□□□□□ -1.75
SMG8-205ENST00000580798 MRPL15Q9P015 296 aaKnown RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 DDX25Q9UHL0 483 aaKnown RBP4.09□□□□□ -1.75
SMG8-205ENST00000580798 TRAV34A0A0B4J273 112 aa4.08□□□□□ -1.76
SMG8-205ENST00000580798 ERICH2A1L162 156 aa4.08□□□□□ -1.76
SMG8-205ENST00000580798 XKRY2A2RUG3 117 aa4.08□□□□□ -1.76
SMG8-205ENST00000580798 DENND3A2RUS2 1198 aa4.08□□□□□ -1.76
SMG8-205ENST00000580798 HMX3A6NHT5 357 aa4.08□□□□□ -1.76
SMG8-205ENST00000580798 KCNU1A8MYU2 1149 aa4.08□□□□□ -1.76
SMG8-205ENST00000580798 TMEM232C9JQI7 657 aa4.08□□□□□ -1.76
SMG8-205ENST00000580798 FAM86B1E9PN63 330 aa4.08□□□□□ -1.76
SMG8-205ENST00000580798 H0Y8G0 127 aa4.08□□□□□ -1.76
SMG8-205ENST00000580798 K7ERQ8 282 aa4.08□□□□□ -1.76
SMG8-205ENST00000580798 QSOX1O00391 747 aa4.08□□□□□ -1.76
SMG8-205ENST00000580798 DYNC1I1O14576 645 aa4.08□□□□□ -1.76
SMG8-205ENST00000580798 TEX28O15482 410 aa4.08□□□□□ -1.76
SMG8-205ENST00000580798 OR5F1O95221 314 aa4.08□□□□□ -1.76
SMG8-205ENST00000580798 MLYCDO95822 493 aa4.08□□□□□ -1.76
SMG8-205ENST00000580798 FTCDO95954 541 aa4.08□□□□□ -1.76
SMG8-205ENST00000580798 GNAI2P04899 355 aa4.08□□□□□ -1.76
SMG8-205ENST00000580798 KRT3P12035 628 aa4.08□□□□□ -1.76
SMG8-205ENST00000580798 GCFC2P16383 781 aaKnown RBP4.08□□□□□ -1.76
SMG8-205ENST00000580798 TSHRP16473 764 aa4.08□□□□□ -1.76
SMG8-205ENST00000580798 SAT1P21673 171 aa4.08□□□□□ -1.76
SMG8-205ENST00000580798 CIITAP33076 1130 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms