RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 RNF10Q8N5U6 811 aaKnown RBP6.56□□□□□ -1.36
TRAF4-213ENST00000578917 CNTD1Q8N815 330 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 TP53I13Q8NBR0 393 aaPredicted RBP6.56□□□□□ -1.36
TRAF4-213ENST00000578917 PLA2G15Q8NCC3 412 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 OR56A4Q8NGH8 313 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 OR4C6Q8NH72 309 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 ARRDC2Q8TBH0 407 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 PIH1D2Q8WWB5 315 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 HTR3CQ8WXA8 447 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 VOPP1Q96AW1 172 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 LRRC45Q96CN5 670 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 AP2M1Q96CW1 435 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 NSMCE3Q96MG7 304 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 WDR92Q96MX6 357 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 DUSP23Q9BVJ7 150 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 GPR63Q9BZJ6 419 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 SLC25A51Q9H1U9 297 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 GLOD4Q9HC38 313 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 LZTFL1Q9NQ48 299 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 PHPT1Q9NRX4 125 aaPredicted RBP6.56□□□□□ -1.36
TRAF4-213ENST00000578917 UBP1Q9NZI7 540 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 NCKIPSDQ9NZQ3 722 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 GULP1Q9UBP9 304 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 TRIM10Q9UDY6 481 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 CD84Q9UIB8 345 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 TRHDEQ9UKU6 1024 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 MUC22E2RYF6 1773 aaPredicted RBP6.56□□□□□ -1.36
TRAF4-213ENST00000578917 ASCC3Q8N3C0 2202 aaKnown RBP6.56□□□□□ -1.36
TRAF4-213ENST00000578917 IGF2RP11717 2491 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 DNAH14Q0VDD8 3507 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 A0A0J9YYE9 177 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 A0A0U1RQS6 177 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 GRID2IPA4D2P6 1211 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 ANKRD66B4E2M5 251 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 APOC4-APOC2K7ER74 178 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 K7ESM1 405 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 PSMD11O00231 422 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 TRIM38O00635 465 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 YY2O15391 372 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 KCNN4O15554 427 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 RFPL3O75679 317 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 CLDN7O95471 211 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 ASMTLO95671 621 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 TOP3BO95985 862 aaKnown RBP6.55□□□□□ -1.36
TRAF4-213ENST00000578917 TRBC1P01850 177 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 APOC2P02655 101 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 C1SP09871 688 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 PIRTP0C851 137 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 PYGMP11217 842 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 TSHRP16473 764 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 ZNF30P17039 623 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 PMLP29590 882 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 HK3P52790 923 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 SKOR1P84550 965 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 OTUD4Q01804 1114 aaKnown RBP6.55□□□□□ -1.36
TRAF4-213ENST00000578917 PTSQ03393 145 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 ADCY2Q08462 1091 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 RALGDSQ12967 914 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 EIF2B5Q13144 721 aaKnown RBP6.55□□□□□ -1.36
TRAF4-213ENST00000578917 XRCC4Q13426 336 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 GALNT3Q14435 633 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 AGERQ15109 404 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 PRKD1Q15139 912 aaPredicted RBP6.55□□□□□ -1.36
TRAF4-213ENST00000578917 RPS6KA1Q15418 735 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 CNGA3Q16281 694 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 PPP2R5EQ16537 467 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 TAZQ16635 292 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 ALG11Q2TAA5 492 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 TPRG1LQ5T0D9 272 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 FAM182AQ5T1J6 154 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 ITPRIPL1Q6GPH6 555 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 ESRP1Q6NXG1 681 aaKnown RBP6.55□□□□□ -1.36
TRAF4-213ENST00000578917 DOK6Q6PKX4 331 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 DHRS13Q6UX07 377 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 TAF8Q7Z7C8 310 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 GKN2Q86XP6 184 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 TMEM139Q8IV31 216 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 CDKL3Q8IVW4 592 aaPredicted RBP6.55□□□□□ -1.36
TRAF4-213ENST00000578917 LRRC8AQ8IWT6 810 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 RBFAQ8N0V3 343 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 GALNT15Q8N3T1 639 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 FSTL5Q8N475 847 aaPredicted RBP6.55□□□□□ -1.36
TRAF4-213ENST00000578917 SLC25A41Q8N5S1 370 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 LRRC57Q8N9N7 239 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 TTC13Q8NBP0 860 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 ZNF548Q8NEK5 533 aaPredicted RBP6.55□□□□□ -1.36
TRAF4-213ENST00000578917 SPATA22Q8NHS9 363 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 ACTL9Q8TC94 416 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 ADAMTS14Q8WXS8 1223 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 SPOCK2Q92563 424 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 IMP4Q96G21 291 aaKnown RBP6.55□□□□□ -1.36
TRAF4-213ENST00000578917 TEKT5Q96M29 485 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 COQ10AQ96MF6 247 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 OLFM3Q96PB7 478 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 ALS2CR12Q96Q35 445 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 SMIM14Q96QK8 99 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 MCCC1Q96RQ3 725 aaPredicted RBP6.55□□□□□ -1.36
TRAF4-213ENST00000578917 SRPK1Q96SB4 655 aaKnown RBP6.55□□□□□ -1.36
TRAF4-213ENST00000578917 VAT1Q99536 393 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 FAM118BQ9BPY3 351 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms