RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 MMP13P45452 471 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 GALNT2Q10471 571 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 C1orf61Q13536 156 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 PERM1Q5SV97 790 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 CERCAMQ5T4B2 595 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 BROXQ5VW32 411 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 USP45Q70EL2 814 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 ZNF765Q7L2R6 523 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 GPR155Q7Z3F1 870 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 MAP7D3Q8IWC1 876 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 PCDH19Q8TAB3 1148 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 GPBAR1Q8TDU6 330 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 TSACCQ96A04 125 aaPredicted RBP14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 FAF2Q96CS3 445 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 DTD2Q96FN9 168 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 SCARF2Q96GP6 870 aaPredicted RBP14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 NSMCE3Q96MG7 304 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 TMEM74Q96NL1 305 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 DCBLD2Q96PD2 775 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 NUP85Q9BW27 656 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 NOD2Q9HC29 1040 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 PHPT1Q9NRX4 125 aaPredicted RBP14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 ETNK2Q9NVF9 386 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 B4GALT6Q9UBX8 382 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 GPR34Q9UPC5 381 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 OR1A2Q9Y585 309 aa14.52□□□□□ -0.09
SMARCE1-213ENST00000578044 SSU72P8A0A1W2PR75 194 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 TMEM202A6NGA9 273 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 D6RAR5 112 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 ZW10O43264 779 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 CPP00450 1065 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 KRT7P08729 469 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 HOXB3P14651 431 aaPredicted RBP14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 MX2P20592 715 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 CCNCP24863 283 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 GARSP41250 739 aaKnown RBP14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 PDX1P52945 283 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 TMPRSS3P57727 454 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 TRIM14Q14142 442 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 NR1D2Q14995 579 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 CNGA3Q16281 694 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 SLC18A3Q16572 532 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 SMTNL2Q2TAL5 461 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 ARMC12Q5T9G4 340 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 ZNF438Q7Z4V0 828 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 LUZP1Q86V48 1076 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 PGBD5Q8N414 524 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 PLA2G15Q8NCC3 412 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 KIAA1524Q8TCG1 905 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 HSPH1Q92598 858 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 NUS1Q96E22 293 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 PDXPQ96GD0 296 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 LYSMD1Q96S90 227 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 LGMNQ99538 433 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 POLR1EQ9GZS1 481 aaKnown RBP14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 CAAP1Q9H8G2 361 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 FGF22Q9HCT0 170 aa14.51□□□□□ -0.09
SMARCE1-213ENST00000578044 A0A1W2PNU3 283 aaPredicted RBP14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 SYCE3A1L190 88 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 PRSS38A1L453 326 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 MATN3O15232 486 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 PROSCO94903 275 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 PCCBP05166 539 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 IVLP07476 585 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 H2AFZP0C0S5 128 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 MYF5P13349 255 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 TCF4P15884 667 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 CA4P22748 312 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 GPR3P46089 330 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 RHDQ02161 417 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 ZFP36L1Q07352 338 aaKnown RBP14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 SQSTM1Q13501 440 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 HLTFQ14527 1009 aaKnown RBP eCLIP14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 IFI16Q16666 785 aaKnown RBP14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 C14orf28Q4W4Y0 310 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 TXNRD3NBQ6F5E7 133 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 H2AFVQ71UI9 128 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 TECPR1Q7Z6L1 1165 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 TP53INP2Q8IXH6 220 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 NRSN1Q8IZ57 195 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 KYQ8NBH2 561 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 PIH1D2Q8WWB5 315 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 OR1E3Q8WZA6 343 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 ATXN7L3BQ96GX2 97 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 FCRL3Q96P31 734 aaPredicted RBP14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 GFM1Q96RP9 751 aaKnown RBP14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 DNAJC7Q99615 494 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 FRMD8Q9BZ67 464 aaPredicted RBP14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 STRADBQ9C0K7 418 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 SATB2Q9UPW6 733 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 SLC17A4Q9Y2C5 497 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 PCDHGC4Q9Y5F7 938 aa14.5□□□□□ -0.09
SMARCE1-213ENST00000578044 SPTA1P02549 2419 aa14.49□□□□□ -0.09
SMARCE1-213ENST00000578044 ERVH48-1M5A8F1 160 aa14.49□□□□□ -0.09
SMARCE1-213ENST00000578044 NOBOXO60393 691 aa14.49□□□□□ -0.09
SMARCE1-213ENST00000578044 CCNB1P14635 433 aa14.49□□□□□ -0.09
SMARCE1-213ENST00000578044 TRAF2Q12933 501 aa14.49□□□□□ -0.09
SMARCE1-213ENST00000578044 ARHGEF7Q14155 803 aa14.49□□□□□ -0.09
SMARCE1-213ENST00000578044 DPYSL3Q14195 570 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms