RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 PCDHGA8Q9Y5G5 932 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 C3orf70A6NLC5 250 aaPredicted RBP16.09■□□□□ 0.17
VAPA-204ENST00000577901 J3QKU1 62 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 APOL1O14791 398 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 PJA2O43164 708 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 GCATO75600 419 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 TCEA3O75764 348 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 PIGNO95427 931 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 PEX11BO96011 259 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 CCNCP24863 283 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 MMP13P45452 471 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 AP1S1P61966 158 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 SKOR1P84550 965 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 BCL2L1Q07817 233 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 KIF5AQ12840 1032 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 FOXR1Q6PIV2 292 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 RFX6Q8HWS3 928 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 TMEM139Q8IV31 216 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 SLC35F3Q8IY50 421 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 PHACTR4Q8IZ21 702 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 ACRBPQ8NEB7 543 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 SNRNP27Q8WVK2 155 aaKnown RBP16.09■□□□□ 0.17
VAPA-204ENST00000577901 TTC9Q92623 222 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 CCDC97Q96F63 343 aaPredicted RBP16.09■□□□□ 0.17
VAPA-204ENST00000577901 TBATAQ96M53 351 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 TSGA13Q96PP4 275 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 LRRC61Q9BV99 259 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 PNMA8BQ9ULN7 279 aaPredicted RBP16.09■□□□□ 0.17
VAPA-204ENST00000577901 TRPM6Q9BX84 2022 aa16.09■□□□□ 0.17
VAPA-204ENST00000577901 FLNBO75369 2602 aaKnown RBP16.08■□□□□ 0.17
VAPA-204ENST00000577901 COL27A1Q8IZC6 1860 aaPredicted RBP16.08■□□□□ 0.17
VAPA-204ENST00000577901 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.08■□□□□ 0.16
VAPA-204ENST00000577901 PMS2P1A4D2B8 440 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 RCCD1A6NED2 376 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 LMO7DNF2Z398 122 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 AREL1O15033 823 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 MATN3O15232 486 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 ZRANB2O95218 330 aaKnown RBP eCLIP16.08■□□□□ 0.162e-6■■□□□ 12.5
VAPA-204ENST00000577901 ANXA6P08133 673 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 TIMP2P16035 220 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 IGFALSP35858 605 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 RGRP47804 291 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 YPEL5P62699 121 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 POLR2LP62875 67 aaKnown RBP16.08■□□□□ 0.16
VAPA-204ENST00000577901 GBE1Q04446 702 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 RALGPS1Q5JS13 557 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 C6orf132Q5T0Z8 1188 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 FAXCQ5TGI0 409 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 SLC9A4Q6AI14 798 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 BRAT1Q6PJG6 821 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 CAMK1DQ8IU85 385 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 RCOR2Q8IZ40 523 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 ARL14Q8N4G2 192 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 CCNYQ8ND76 341 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 WDR48Q8TAF3 677 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 KIAA1524Q8TCG1 905 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 NAT6Q93015 286 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 FATE1Q969F0 183 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 MGME1Q9BQP7 344 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 C1QTNF7Q9BXJ2 289 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 SLC13A1Q9BZW2 595 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 SEMA4CQ9C0C4 833 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 HEY1Q9Y5J3 304 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 DUSP10Q9Y6W6 482 aa16.08■□□□□ 0.16
VAPA-204ENST00000577901 A0A1W2PQ67 120 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 CDRT15L2A8MXV6 281 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 CASC3O15234 703 aaKnown RBP16.07■□□□□ 0.16
VAPA-204ENST00000577901 YY2O15391 372 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 MMP20O60882 483 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 TM7SF2O76062 418 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 TNFSF15O95150 251 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 MAP3K6O95382 1288 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 ELP6Q0PNE2 266 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 TFDP2Q14188 446 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 LY6DQ14210 128 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 UGP2Q16851 508 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 LRRC73Q5JTD7 316 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 ESRP1Q6NXG1 681 aaKnown RBP16.07■□□□□ 0.16
VAPA-204ENST00000577901 ERAP2Q6P179 960 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 MACC1Q6ZN28 852 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 BZW1Q7L1Q6 419 aaKnown RBP16.07■□□□□ 0.16
VAPA-204ENST00000577901 KATNAL2Q8IYT4 538 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 TEX26Q8N6G2 289 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 WDR36Q8NI36 951 aaKnown RBP16.07■□□□□ 0.16
VAPA-204ENST00000577901 CXorf40AQ8TE69 158 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 HDAC11Q96DB2 347 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 NUDCD1Q96RS6 583 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 CCDC3Q9BQI4 270 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 LACRTQ9GZZ8 138 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 CLPBQ9H078 707 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 GOLPH3Q9H4A6 298 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 SYNDIG1Q9H7V2 258 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 MBNL1Q9NR56 388 aaKnown RBP16.07■□□□□ 0.16
VAPA-204ENST00000577901 DTLQ9NZJ0 730 aa16.07■□□□□ 0.16
VAPA-204ENST00000577901 TSPAN11A1L157 253 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 K7ENP7 123 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 TSHRP16473 764 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 CES1P23141 567 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 MLLT3P42568 568 aaPredicted RBP16.06■□□□□ 0.16
VAPA-204ENST00000577901 CDKN2BP42772 138 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms