RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 USP29Q9HBJ7 922 aa19.34■□□□□ 0.69
SS18-208ENST00000577751 KLHL8Q9P2G9 620 aaPredicted RBP19.34■□□□□ 0.69
SS18-208ENST00000577751 DNPEPQ9ULA0 475 aa19.34■□□□□ 0.69
SS18-208ENST00000577751 TCRBV7S2A1N4TA0A589 114 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 GOLGA6L9A6NEM1 432 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 PCCBP05166 539 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 ADRB1P08588 477 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 NME1P15531 152 aaKnown RBP19.33■□□□□ 0.68
SS18-208ENST00000577751 ETV3P41162 512 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 THOP1P52888 689 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 FOXK2Q01167 660 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 EIF2B5Q13144 721 aaKnown RBP19.33■□□□□ 0.68
SS18-208ENST00000577751 RPS6KA1Q15418 735 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 TRIP6Q15654 476 aaKnown RBP19.33■□□□□ 0.68
SS18-208ENST00000577751 LRRC66Q68CR7 880 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 DENND2CQ68D51 928 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 KDELC1Q6UW63 502 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 MACC1Q6ZN28 852 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 Q6ZVL8 140 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 PELI3Q8N2H9 469 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 SLC25A45Q8N413 288 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 ANP32BQ92688 251 aaKnown RBP19.33■□□□□ 0.68
SS18-208ENST00000577751 NUS1Q96E22 293 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 CDC6Q99741 560 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 FAM118BQ9BPY3 351 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 CAAP1Q9H8G2 361 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 FAM153AQ9UHL3 310 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 KLF15Q9UIH9 416 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 PNMA8BQ9ULN7 279 aaPredicted RBP19.33■□□□□ 0.68
SS18-208ENST00000577751 OR1A2Q9Y585 309 aa19.33■□□□□ 0.68
SS18-208ENST00000577751 ARID1BQ8NFD5 2236 aaPredicted RBP19.32■□□□□ 0.68
SS18-208ENST00000577751 SPAARA0A1B0GVQ0 90 aa19.32■□□□□ 0.68
SS18-208ENST00000577751 GOLGA8CPA6NN73 597 aa19.32■□□□□ 0.68
SS18-208ENST00000577751 SDC3O75056 442 aa19.32■□□□□ 0.68
SS18-208ENST00000577751 PIAS2O75928 621 aa19.32■□□□□ 0.68
SS18-208ENST00000577751 HOXC4P09017 264 aaPredicted RBP19.32■□□□□ 0.68
SS18-208ENST00000577751 C1SP09871 688 aa19.32■□□□□ 0.68
SS18-208ENST00000577751 KCNA4P22459 653 aa19.32■□□□□ 0.68
SS18-208ENST00000577751 DGKAP23743 735 aa19.32■□□□□ 0.68
SS18-208ENST00000577751 STC1P52823 247 aa19.32■□□□□ 0.68
SS18-208ENST00000577751 HNRNPKP61978 463 aaKnown RBP eCLIP19.32■□□□□ 0.68
SS18-208ENST00000577751 GALNT3Q14435 633 aa19.32■□□□□ 0.68
SS18-208ENST00000577751 NFATC4Q14934 902 aa19.32■□□□□ 0.68
SS18-208ENST00000577751 PCSK7Q16549 785 aa19.32■□□□□ 0.68
SS18-208ENST00000577751 INAVAQ3KP66 663 aa19.32■□□□□ 0.68
SS18-208ENST00000577751 ZNF542PQ5EBM4 170 aa19.32■□□□□ 0.68
SS18-208ENST00000577751 PNCKQ6P2M8 343 aa19.32■□□□□ 0.68
SS18-208ENST00000577751 DARS2Q6PI48 645 aaKnown RBP19.32■□□□□ 0.68
SS18-208ENST00000577751 NLRP8Q86W28 1048 aa19.32■□□□□ 0.68
SS18-208ENST00000577751 SLC35B2Q8TB61 432 aa19.32■□□□□ 0.68
SS18-208ENST00000577751 OXNAD1Q96HP4 312 aaPredicted RBP19.32■□□□□ 0.68
SS18-208ENST00000577751 FERMT1Q9BQL6 677 aa19.32■□□□□ 0.68
SS18-208ENST00000577751 CARD9Q9H257 536 aa19.32■□□□□ 0.68
SS18-208ENST00000577751 DNAJC28Q9NX36 388 aa19.32■□□□□ 0.68
SS18-208ENST00000577751 UBP1Q9NZI7 540 aa19.32■□□□□ 0.68
SS18-208ENST00000577751 LRP4O75096 1905 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 LOC285095A0A1B0GVY8 99 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 K7ESM1 405 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 KCNN4O15554 427 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 PMPCBO75439 489 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 ZNF189O75820 626 aaPredicted RBP19.31■□□□□ 0.68
SS18-208ENST00000577751 CLDN7O95471 211 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 NDST3O95803 873 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 EPOP01588 193 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 PTMAP06454 111 aaKnown RBP19.31■□□□□ 0.68
SS18-208ENST00000577751 GIMD1P0DJR0 217 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 TEAD1P28347 426 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 SIM1P81133 766 aaPredicted RBP19.31■□□□□ 0.68
SS18-208ENST00000577751 DPTQ07507 201 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 ANKRD20A2Q5SQ80 823 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 SEL1L2Q5TEA6 688 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 ANKRD20A1Q5TYW2 823 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 ANKRD20A3Q5VUR7 823 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 RFLNAQ6ZTI6 216 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 KDELC2Q7Z4H8 507 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 REXO1L1PQ8IX06 675 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 FUBP1Q96AE4 644 aaKnown RBP19.31■□□□□ 0.68
SS18-208ENST00000577751 TLR10Q9BXR5 811 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 GBA3Q9H227 469 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 MAGEE1Q9HCI5 957 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 UCKL1Q9NWZ5 548 aa19.31■□□□□ 0.68
SS18-208ENST00000577751 R3HDM2Q9Y2K5 976 aaKnown RBP19.31■□□□□ 0.68
SS18-208ENST00000577751 TSHRP16473 764 aa19.3■□□□□ 0.68
SS18-208ENST00000577751 JUNDP17535 347 aa19.3■□□□□ 0.68
SS18-208ENST00000577751 HTR1BP28222 390 aa19.3■□□□□ 0.68
SS18-208ENST00000577751 WNT3AP56704 352 aa19.3■□□□□ 0.68
SS18-208ENST00000577751 KIAA1024LP59773 190 aa19.3■□□□□ 0.68
SS18-208ENST00000577751 MPP3Q13368 585 aa19.3■□□□□ 0.68
SS18-208ENST00000577751 ZNF765Q7L2R6 523 aa19.3■□□□□ 0.68
SS18-208ENST00000577751 SLC13A5Q86YT5 568 aaPredicted RBP19.3■□□□□ 0.68
SS18-208ENST00000577751 NRSN1Q8IZ57 195 aa19.3■□□□□ 0.68
SS18-208ENST00000577751 EID2Q8N6I1 236 aa19.3■□□□□ 0.68
SS18-208ENST00000577751 BTN2A2Q8WVV5 523 aa19.3■□□□□ 0.68
SS18-208ENST00000577751 MRGPRX2Q96LB1 330 aa19.3■□□□□ 0.68
SS18-208ENST00000577751 TBATAQ96M53 351 aa19.3■□□□□ 0.68
SS18-208ENST00000577751 GORASP1Q9BQQ3 440 aa19.3■□□□□ 0.68
SS18-208ENST00000577751 TEX101Q9BY14 249 aa19.3■□□□□ 0.68
SS18-208ENST00000577751 ABCG8Q9H221 673 aa19.3■□□□□ 0.68
SS18-208ENST00000577751 RSPH14Q9UHP6 348 aa19.3■□□□□ 0.68
SS18-208ENST00000577751 SPTBN2O15020 2390 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms