RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 DPPA4Q7L190 304 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 KCNMB4Q86W47 210 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 ZNF366Q8N895 744 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 FAM131CQ96AQ9 280 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 MTBPQ96DY7 904 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 CDKN2AIPNLQ96HQ2 116 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 ZNF778Q96MU6 729 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 TCF12Q99081 682 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 IER2Q9BTL4 223 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 MTG2Q9H4K7 406 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 PPANQ9NQ55 473 aaKnown RBP15.29■□□□□ 0.04
SS18-206ENST00000577572 TXNDC16Q9P2K2 825 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 PSMC3IPQ9P2W1 217 aaPredicted RBP15.29■□□□□ 0.04
SS18-206ENST00000577572 VPS9D1Q9Y2B5 631 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 ARL5AQ9Y689 179 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 C1orf232A0A0U1RR37 186 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 A0A1W2PQF6 199 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 KANSL1LA0AUZ9 987 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 GOLGA8KD6RF30 607 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 AREL1O15033 823 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 ADAM23O75077 832 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 RNF40O75150 1001 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 FAM155BO75949 473 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 CTPS1P17812 591 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 GP5P40197 560 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 POLD2P49005 469 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 CSE1LP55060 971 aaKnown RBP15.28■□□□□ 0.04
SS18-206ENST00000577572 SEC13P55735 322 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 CREB5Q02930 508 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 AARS2Q5JTZ9 985 aaKnown RBP15.28■□□□□ 0.04
SS18-206ENST00000577572 TEDDM1Q5T9Z0 273 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 GRTP1Q5TC63 336 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 AGBL2Q5U5Z8 902 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 MRNIPQ6NTE8 343 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 CAPN12Q6ZSI9 719 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 PARS2Q7L3T8 475 aaKnown RBP15.28■□□□□ 0.04
SS18-206ENST00000577572 LYSMD3Q7Z3D4 306 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 MMAAQ8IVH4 418 aaKnown RBP15.28■□□□□ 0.04
SS18-206ENST00000577572 NRSN1Q8IZ57 195 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 TXNDC5Q8NBS9 432 aaKnown RBP15.28■□□□□ 0.04
SS18-206ENST00000577572 PLEKHG4BQ96PX9 1271 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 PAFAH2Q99487 392 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 TMBIM4Q9HC24 238 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 CD248Q9HCU0 757 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 PCDH12Q9NPG4 1184 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 EURLQ9NYK6 297 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 SENP1Q9P0U3 644 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 B4GALT6Q9UBX8 382 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 FBXL21Q9UKT6 434 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 SARDHQ9UL12 918 aa15.28■□□□□ 0.04
SS18-206ENST00000577572 SPTBN5Q9NRC6 3674 aaKnown RBP15.27■□□□□ 0.04
SS18-206ENST00000577572 IQANK1A0A1B0GTG1 560 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 NPIPB15A6NHN6 443 aaPredicted RBP15.27■□□□□ 0.04
SS18-206ENST00000577572 HMGB1P1B2RPK0 211 aaPredicted RBP15.27■□□□□ 0.04
SS18-206ENST00000577572 RGS16O15492 202 aaPredicted RBP15.27■□□□□ 0.04
SS18-206ENST00000577572 TSPAN6O43657 245 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 KRT37O76014 449 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 KRT38O76015 456 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 ALPIP09923 528 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 PIRTP0C851 137 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 ADRB3P13945 408 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 OGNP20774 298 aaKnown RBP15.27■□□□□ 0.04
SS18-206ENST00000577572 ARNTP27540 789 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 PPARGP37231 505 aaPredicted RBP15.27■□□□□ 0.04
SS18-206ENST00000577572 MMP12P39900 470 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 DGKEP52429 567 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 STC1P52823 247 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 COPAP53621 1224 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 DCDC1P59894 354 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 RPS14P62263 151 aaKnown RBP15.27■□□□□ 0.04
SS18-206ENST00000577572 GPR33Q49SQ1 333 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 TMEM52BQ4KMG9 183 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 HSP90AA5PQ58FG0 334 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 TNFAIP8L3Q5GJ75 292 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 UBAP2Q5T6F2 1119 aaKnown RBP15.27■□□□□ 0.04
SS18-206ENST00000577572 IER5LQ5T953 404 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 LYPLAL1Q5VWZ2 237 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 CES3Q6UWW8 571 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 CERS6Q6ZMG9 384 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 USP30Q70CQ3 517 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 SYT13Q7L8C5 426 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 CYP2U1Q7Z449 544 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 SDCCAG8Q86SQ7 713 aaPredicted RBP15.27■□□□□ 0.04
SS18-206ENST00000577572 KBTBD6Q86V97 674 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 NLRP8Q86W28 1048 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 RASSF3Q86WH2 238 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 CTAGE3PQ8IX95 158 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 PPM1NQ8N819 430 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 OR4K2Q8NGD2 314 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 OR4L1Q8NH43 312 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 OR2W6PQ8NHA6 318 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 UHMK1Q8TAS1 419 aaKnown RBP15.27■□□□□ 0.04
SS18-206ENST00000577572 HDAC10Q969S8 669 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 DNAJC1Q96KC8 554 aaKnown RBP15.27■□□□□ 0.04
SS18-206ENST00000577572 TTC1Q99614 292 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 TRIM56Q9BRZ2 755 aaKnown RBP15.27■□□□□ 0.04
SS18-206ENST00000577572 LTB4R2Q9NPC1 389 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 PKD2L2Q9NZM6 624 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 SLC2A6Q9UGQ3 507 aa15.27■□□□□ 0.04
SS18-206ENST00000577572 CORO1CQ9ULV4 474 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms