RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 IPMKQ8NFU5 416 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 OR13H1Q8NG92 308 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 ATL2Q8NHH9 583 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 CCDC110Q8TBZ0 833 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 CCHCR1Q8TD31 782 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 CENPTQ96BT3 561 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 RTP4Q96DX8 246 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 DTD2Q96FN9 168 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 COQ10AQ96MF6 247 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 ELF4Q99607 663 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 ZNF148Q9UQR1 794 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 C1orf232A0A0U1RR37 186 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 POM121BA6NF01 834 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 A8MX80 341 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 H0Y8X5 98 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 PGRMC1O00264 195 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 CES2O00748 559 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 ATP1A1P05023 1023 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 FGF1P05230 155 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 PYGLP06737 847 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 ITGAVP06756 1048 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 TCP1P17987 556 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 STC1P52823 247 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 PFN3P60673 137 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 GNG11P61952 73 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 GALNT3Q14435 633 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 PUM1Q14671 1186 aaKnown RBP eCLIP12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 SUZ12Q15022 739 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 WSCD2Q2TBF2 565 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 DENND2CQ68D51 928 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 ESRP1Q6NXG1 681 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 CRTC1Q6UUV9 634 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 Q6ZSR6 202 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 ZNF765Q7L2R6 523 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 TSPAN33Q86UF1 283 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 NRSN1Q8IZ57 195 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 RASGEF1CQ8N431 466 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 CCDC89Q8N998 374 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 C1orf54Q8WWF1 131 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 OXNAD1Q96HP4 312 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 MRGPRX2Q96LB1 330 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 BMFQ96LC9 184 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 TMEM121Q9BTD3 319 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 GPR27Q9NS67 375 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 RAD18Q9NS91 495 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 KCND1Q9NSA2 647 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 UBP1Q9NZI7 540 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 PKD2L2Q9NZM6 624 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 HACD3Q9P035 362 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 TTC7AQ9ULT0 858 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 SNX12Q9UMY4 172 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 FNDC3AQ9Y2H6 1198 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 PCDHGB2Q9Y5G2 931 aa12.72□□□□□ -0.37
CDK5RAP3-203ENST00000577442 A0A1B0GTQ1 180 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 LOC285095A0A1B0GVY8 99 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 RGSL1A5PLK6 1076 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 F5H423 210 aaPredicted RBP12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 PSMD3O43242 534 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 IFNB1P01574 187 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 PCCBP05166 539 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 TSHRP16473 764 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 HTR1BP28222 390 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 TEAD1P28347 426 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 PDE1CQ14123 709 aaPredicted RBP12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 SIX1Q15475 284 aaPredicted RBP12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 PARP6Q2NL67 630 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 MACC1Q6ZN28 852 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 KDELC2Q7Z4H8 507 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 HSD11B1LQ7Z5J1 315 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 PARGQ86W56 976 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 OR2I1PQ8NGU4 316 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 OSBPL9Q96SU4 736 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 FICDQ9BVA6 458 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 CDH19Q9H159 772 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 TRABDQ9H4I3 376 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 WDR26Q9H7D7 661 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 MAGEE1Q9HCI5 957 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 MBNL1Q9NR56 388 aaKnown RBP12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 TM7SF3Q9NS93 570 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 DLL3Q9NYJ7 618 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 FEZ2Q9UHY8 353 aaPredicted RBP12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 DRG1Q9Y295 367 aaKnown RBP12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 ZNF711Q9Y462 761 aa12.71□□□□□ -0.37
CDK5RAP3-203ENST00000577442 NCOR2Q9Y618 2525 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 GOLGA6L10A0A0M3HER8 536 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SPTY2D1-AS1A0A0U1RR47 76 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 ERI2A8K979 691 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 H3BM21 787 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 CACNB4O00305 520 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PDE2AO00408 941 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 FLRT2O43155 660 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PCDHGA12O60330 932 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 C1SP09871 688 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 ATXN1LP0C7T5 689 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 GM2AP17900 193 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 KELP23276 732 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 EPHA8P29322 1005 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 FDFT1P37268 417 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 ETV3P41162 512 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 ID4P47928 161 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms