RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 RAB6CQ9H0N0 254 aa13.37□□□□□ -0.27
COPS3-214ENST00000577246 TRIT1Q9H3H1 467 aaKnown RBP13.37□□□□□ -0.27
COPS3-214ENST00000577246 ZNF71Q9NQZ8 489 aaPredicted RBP13.37□□□□□ -0.27
COPS3-214ENST00000577246 KCNK4Q9NYG8 393 aa13.37□□□□□ -0.27
COPS3-214ENST00000577246 FHOD1Q9Y613 1164 aa13.37□□□□□ -0.27
COPS3-214ENST00000577246 IGHV1OR21-1A0A087WYE8 117 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 A0A1W2PQ67 120 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 ARHGAP42A6NI28 874 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 EFCAB7A8K855 629 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 PES1O00541 588 aaKnown RBP13.36□□□□□ -0.27
COPS3-214ENST00000577246 BUB1BO60566 1050 aaPredicted RBP13.36□□□□□ -0.27
COPS3-214ENST00000577246 PRAMEF11O60813 436 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 PALMO75781 387 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 CYP1A1P04798 512 aaPredicted RBP13.36□□□□□ -0.27
COPS3-214ENST00000577246 PRKCGP05129 697 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 PRKAR1AP10644 381 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 UCHL3P15374 230 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 GNPDA1P46926 289 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 PPM1FP49593 454 aaPredicted RBP13.36□□□□□ -0.27
COPS3-214ENST00000577246 CDR2Q01850 454 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 KLRB1Q12918 225 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 RFTN1Q14699 578 aaPredicted RBP13.36□□□□□ -0.27
COPS3-214ENST00000577246 CRTC2Q53ET0 693 aaPredicted RBP13.36□□□□□ -0.27
COPS3-214ENST00000577246 SCYL2Q6P3W7 929 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 TMEM71Q6P5X7 295 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 SLC30A9Q6PML9 568 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 CEACAM20Q6UY09 585 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 ZSWIM9Q86XI8 627 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 NRROSQ86YC3 692 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 MLKLQ8NB16 471 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 JOSD2Q8TAC2 188 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 PMEPA1Q969W9 287 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 ECHDC3Q96DC8 303 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 NUS1Q96E22 293 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 ABHD17AQ96GS6 310 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 C11orf70Q9BRQ4 267 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 TUBGCP2Q9BSJ2 902 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 SELENOOQ9BVL4 669 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 CINPQ9BW66 212 aaPredicted RBP13.36□□□□□ -0.27
COPS3-214ENST00000577246 SUDS3Q9H7L9 328 aaPredicted RBP13.36□□□□□ -0.27
COPS3-214ENST00000577246 PDFQ9HBH1 243 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 PILRAQ9UKJ1 303 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 LRP4O75096 1905 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 DOPEY2Q9Y3R5 2298 aa13.36□□□□□ -0.27
COPS3-214ENST00000577246 DUX1O43812 170 aa13.35□□□□□ -0.27
COPS3-214ENST00000577246 NSFP46459 744 aaKnown RBP13.35□□□□□ -0.27
COPS3-214ENST00000577246 GSCP56915 257 aaPredicted RBP13.35□□□□□ -0.27
COPS3-214ENST00000577246 TPI1P60174 286 aa13.35□□□□□ -0.27
COPS3-214ENST00000577246 AP1S1P61966 158 aa13.35□□□□□ -0.27
COPS3-214ENST00000577246 NSUN2Q08J23 767 aaKnown RBP eCLIP13.35□□□□□ -0.27
COPS3-214ENST00000577246 ABHD18Q0P651 414 aa13.35□□□□□ -0.27
COPS3-214ENST00000577246 NKAIN2Q5VXU1 208 aa13.35□□□□□ -0.27
COPS3-214ENST00000577246 KDELC2Q7Z4H8 507 aa13.35□□□□□ -0.27
COPS3-214ENST00000577246 HEATR4Q86WZ0 1026 aa13.35□□□□□ -0.27
COPS3-214ENST00000577246 PYROXD2Q8N2H3 581 aa13.35□□□□□ -0.27
COPS3-214ENST00000577246 OR10G6Q8NH81 332 aa13.35□□□□□ -0.27
COPS3-214ENST00000577246 NAA15Q9BXJ9 866 aaKnown RBP13.35□□□□□ -0.27
COPS3-214ENST00000577246 TEX101Q9BY14 249 aa13.35□□□□□ -0.27
COPS3-214ENST00000577246 MAGEB5Q9BZ81 275 aa13.35□□□□□ -0.27
COPS3-214ENST00000577246 LRRC19Q9H756 370 aa13.35□□□□□ -0.27
COPS3-214ENST00000577246 KIAA1468Q9P260 1216 aa13.35□□□□□ -0.27
COPS3-214ENST00000577246 SUFUQ9UMX1 484 aa13.35□□□□□ -0.27
COPS3-214ENST00000577246 KCTD3Q9Y597 815 aa13.35□□□□□ -0.27
COPS3-214ENST00000577246 CHD5Q8TDI0 1954 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.34□□□□□ -0.27
COPS3-214ENST00000577246 BLACEA4D250 179 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 PRR19A6NJB7 356 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 J3KR12 359 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 NKX2-8O15522 239 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 CALB1P05937 261 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 CEACAM5P06731 702 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 IVLP07476 585 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 RFC1P35251 1148 aaPredicted RBP13.34□□□□□ -0.27
COPS3-214ENST00000577246 ACTR1BP42025 376 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 CD97P48960 835 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 RENBPP51606 427 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 ACTR1AP61163 376 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 ANKS6Q68DC2 871 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 DPY19L2P1Q6NXN4 242 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 PHLDB2Q86SQ0 1253 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 NAGSQ8N159 534 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 TSEN2Q8NCE0 465 aaKnown RBP13.34□□□□□ -0.27
COPS3-214ENST00000577246 C3orf20Q8ND61 904 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 SLC30A5Q8TAD4 765 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 STARD8Q92502 1023 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 MIB2Q96AX9 1013 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 RTP4Q96DX8 246 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 COQ10AQ96MF6 247 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 SLC38A3Q99624 504 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 FRMD8Q9BZ67 464 aaPredicted RBP13.34□□□□□ -0.27
COPS3-214ENST00000577246 STN1Q9H668 368 aaKnown RBP13.34□□□□□ -0.27
COPS3-214ENST00000577246 SP110Q9HB58 689 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 OCIAD1Q9NX40 245 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 ADAM22Q9P0K1 906 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 PDP2Q9P2J9 529 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 NOCTQ9UK39 431 aaKnown RBP13.34□□□□□ -0.27
COPS3-214ENST00000577246 FZD10Q9ULW2 581 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 PLAAQ9Y263 795 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 PCDHB3Q9Y5E6 796 aa13.34□□□□□ -0.27
COPS3-214ENST00000577246 LRRK2Q5S007 2527 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms