RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 CTAGE6Q86UF2 777 aa13.99□□□□□ -0.17
RPAIN-217ENST00000575711 CTAGE4Q8IX94 777 aa13.99□□□□□ -0.17
RPAIN-217ENST00000575711 RAVER1Q8IY67 606 aaKnown RBP13.99□□□□□ -0.17
RPAIN-217ENST00000575711 ZCCHC9Q8N567 271 aaKnown RBP13.99□□□□□ -0.17
RPAIN-217ENST00000575711 DENND6BQ8NEG7 585 aa13.99□□□□□ -0.17
RPAIN-217ENST00000575711 OR52K1Q8NGK4 314 aa13.99□□□□□ -0.17
RPAIN-217ENST00000575711 COQ10AQ96MF6 247 aa13.99□□□□□ -0.17
RPAIN-217ENST00000575711 LENG8Q96PV6 779 aaPredicted RBP13.99□□□□□ -0.17
RPAIN-217ENST00000575711 MYOCQ99972 504 aa13.99□□□□□ -0.17
RPAIN-217ENST00000575711 ORAI3Q9BRQ5 295 aa13.99□□□□□ -0.17
RPAIN-217ENST00000575711 FZD3Q9NPG1 666 aa13.99□□□□□ -0.17
RPAIN-217ENST00000575711 AASDHPPTQ9NRN7 309 aa13.99□□□□□ -0.17
RPAIN-217ENST00000575711 KCTD5Q9NXV2 234 aa13.99□□□□□ -0.17
RPAIN-217ENST00000575711 PKD2L2Q9NZM6 624 aa13.99□□□□□ -0.17
RPAIN-217ENST00000575711 SPO11Q9Y5K1 396 aa13.99□□□□□ -0.17
RPAIN-217ENST00000575711 A0A1B0GTW7 788 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 GOLGA8CPA6NN73 597 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 PRR5-ARHGAP8B1AHC4 643 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 AP3B1O00203 1094 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 C1SP09871 688 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 MPLP40238 635 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 ETV3P41162 512 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 MAGEA6P43360 314 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 RACK1P63244 317 aaKnown RBP13.98□□□□□ -0.17
RPAIN-217ENST00000575711 KCNJ11Q14654 390 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 STAT4Q14765 748 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 LRRC14Q15048 493 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 AGERQ15109 404 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 PEAR1Q5VY43 1037 aaPredicted RBP13.98□□□□□ -0.17
RPAIN-217ENST00000575711 TMC3Q7Z5M5 1100 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 PCGF5Q86SE9 256 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 CBARPQ8N350 705 aaPredicted RBP13.98□□□□□ -0.17
RPAIN-217ENST00000575711 CEP112Q8N8E3 955 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 CEP76Q8TAP6 659 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 BRSK1Q8TDC3 778 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 CPT1BQ92523 772 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 NUS1Q96E22 293 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 DTD2Q96FN9 168 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 SLC6A18Q96N87 628 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 TRIM51Q9BSJ1 452 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 ARRDC1-AS1Q9H2J1 176 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 TM9SF3Q9HD45 589 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 CASS4Q9NQ75 786 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 TMEM74BQ9NUR3 256 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 PIH1D1Q9NWS0 290 aaKnown RBP13.98□□□□□ -0.17
RPAIN-217ENST00000575711 NCDNQ9UBB6 729 aa13.98□□□□□ -0.17
RPAIN-217ENST00000575711 THADAQ6YHU6 1953 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 TCRBV7S3A2A0A539 114 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 RGSL1A5PLK6 1076 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 C2orf81A6NN90 581 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 DNALI1O14645 258 aaPredicted RBP13.97□□□□□ -0.17
RPAIN-217ENST00000575711 FPGTO14772 594 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 AURKAO14965 403 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 RAD51BO15315 384 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 RAD51CO43502 376 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 CRTAMO95727 393 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 TPH1P17752 444 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 GM2AP17900 193 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 HMGCLP35914 325 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 GRIA1P42261 906 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 AFF3P51826 1226 aaKnown RBP13.97□□□□□ -0.17
RPAIN-217ENST00000575711 PDE1BQ01064 536 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 TEAD4Q15561 434 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 TAF1AQ15573 450 aaPredicted RBP13.97□□□□□ -0.17
RPAIN-217ENST00000575711 DUOXA1Q1HG43 343 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 WSCD2Q2TBF2 565 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 Q6ZVL8 140 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 TECPR1Q7Z6L1 1165 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 PPIL6Q8IXY8 311 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 NRSN1Q8IZ57 195 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 TP53I13Q8NBR0 393 aaPredicted RBP13.97□□□□□ -0.17
RPAIN-217ENST00000575711 TMEM145Q8NBT3 493 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 C1orf216Q8TAB5 229 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 FAM174AQ8TBP5 190 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 CENPTQ96BT3 561 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 KLF6Q99612 283 aaPredicted RBP13.97□□□□□ -0.17
RPAIN-217ENST00000575711 RAD18Q9NS91 495 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.97□□□□□ -0.17
RPAIN-217ENST00000575711 PKP3Q9Y446 797 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 HS3ST3A1Q9Y663 406 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 ABCA7Q8IZY2 2146 aa13.97□□□□□ -0.17
RPAIN-217ENST00000575711 EFCAB8A8MWE9 144 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 NDC80O14777 642 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 TMEM63AO94886 807 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 PCCBP05166 539 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 LPOP22079 712 aaPredicted RBP13.96□□□□□ -0.17
RPAIN-217ENST00000575711 CD38P28907 300 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 IGFALSP35858 605 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 SPINT3P49223 89 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 CLDN2P57739 230 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 MRPS25P82663 173 aaKnown RBP13.96□□□□□ -0.17
RPAIN-217ENST00000575711 SEPT6Q14141 434 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 POU6F1Q14863 301 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 IRF4Q15306 451 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 RNASEH2BQ5TBB1 312 aaKnown RBP13.96□□□□□ -0.17
RPAIN-217ENST00000575711 ANKRD22Q5VYY1 191 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 IZUMO3Q5VZ72 239 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 C8orf74Q6P047 294 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 LRRC8BQ6P9F7 803 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 GCNT7Q6ZNI0 430 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms