RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 GTSE1Q9NYZ3 720 aa14.06□□□□□ -0.16
VPS33B-208ENST00000574755 LOC100653049A0A140TA62 436 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 CARNS1A5YM72 827 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 ANKRD66B4E2M5 251 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 KRT34O76011 436 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 SNUPNO95149 360 aaKnown RBP14.05□□□□□ -0.16
VPS33B-208ENST00000574755 WISP3O95389 354 aaPredicted RBP14.05□□□□□ -0.16
VPS33B-208ENST00000574755 TPBGLP0DKB5 382 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 HNRNPLP14866 589 aaKnown RBP eCLIP14.05□□□□□ -0.16
VPS33B-208ENST00000574755 CPOXP36551 454 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 SERPINB5P36952 375 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 RAP1GDS1P52306 607 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 TYSND1Q2T9J0 566 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 LSM12Q3MHD2 195 aaKnown RBP14.05□□□□□ -0.16
VPS33B-208ENST00000574755 ACCSLQ4AC99 568 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 ACSBG2Q5FVE4 666 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 AFTPHQ6ULP2 937 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 FAM136AQ96C01 138 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 PAWRQ96IZ0 340 aaKnown RBP14.05□□□□□ -0.16
VPS33B-208ENST00000574755 CLPTM1LQ96KA5 538 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 INTS10Q9NVR2 710 aaKnown RBP14.05□□□□□ -0.16
VPS33B-208ENST00000574755 CDYLQ9Y232 598 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 TMEM233B4DJY2 109 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 EFCAB14O75071 495 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 ZMPSTE24O75844 475 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 OLFM2O95897 454 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 JUNP05412 331 aaKnown RBP14.05□□□□□ -0.16
VPS33B-208ENST00000574755 CKMP06732 381 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 RAG1P15918 1043 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 RHOAP61586 193 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 CYP4F8P98187 520 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 SLC25A3Q00325 362 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 PDAP1Q13442 181 aaKnown RBP14.05□□□□□ -0.16
VPS33B-208ENST00000574755 INO80DQ53TQ3 878 aaPredicted RBP14.05□□□□□ -0.16
VPS33B-208ENST00000574755 OTOP2Q7RTS6 562 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 ISCA2Q86U28 154 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 SLC22A9Q8IVM8 553 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 ULK2Q8IYT8 1036 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 RYBPQ8N488 228 aaPredicted RBP14.05□□□□□ -0.16
VPS33B-208ENST00000574755 EFHBQ8N7U6 833 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 ENDOVQ8N8Q3 282 aaKnown RBP14.05□□□□□ -0.16
VPS33B-208ENST00000574755 MAB21L3Q8N8X9 362 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 TACO1Q9BSH4 297 aaKnown RBP14.05□□□□□ -0.16
VPS33B-208ENST00000574755 MAFFQ9ULX9 164 aa14.05□□□□□ -0.16
VPS33B-208ENST00000574755 FCF1Q9Y324 198 aaKnown RBP14.05□□□□□ -0.16
VPS33B-208ENST00000574755 TRIM43BA6NCK2 446 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 TGM5O43548 720 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 GREM1O60565 184 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 FGF18O76093 207 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 CNPP09543 421 aaKnown RBP14.04□□□□□ -0.16
VPS33B-208ENST00000574755 ZNF37AP17032 561 aaPredicted RBP14.04□□□□□ -0.16
VPS33B-208ENST00000574755 LPOP22079 712 aaPredicted RBP14.04□□□□□ -0.16
VPS33B-208ENST00000574755 CSKP41240 450 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 ABL2P42684 1182 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 TRAF2Q12933 501 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 KLF10Q13118 480 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 NXNQ6DKJ4 435 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 Q6ZNB5 142 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 KDM1BQ8NB78 822 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 WFDC5Q8TCV5 224 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 DDI1Q8WTU0 396 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 MRPS31Q92665 395 aaKnown RBP14.04□□□□□ -0.16
VPS33B-208ENST00000574755 STMN2Q93045 179 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 TRIM43Q96BQ3 446 aaPredicted RBP14.04□□□□□ -0.16
VPS33B-208ENST00000574755 ZBED2Q9BTP6 218 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 CCDC68Q9H2F9 335 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 VPS51Q9UID3 782 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 LSM7Q9UK45 103 aaKnown RBP14.04□□□□□ -0.16
VPS33B-208ENST00000574755 FNDC3AQ9Y2H6 1198 aaKnown RBP14.04□□□□□ -0.16
VPS33B-208ENST00000574755 FIS1Q9Y3D6 152 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 CIB2O75838 187 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 LRG1P02750 347 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 CREMQ03060 361 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 NAA25Q14CX7 972 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 NCEH1Q6PIU2 408 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 RPS27LQ71UM5 84 aaKnown RBP14.04□□□□□ -0.16
VPS33B-208ENST00000574755 MFN1Q8IWA4 741 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 ZNF333Q96JL9 665 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 AARSD1Q9BTE6 412 aaKnown RBP14.04□□□□□ -0.16
VPS33B-208ENST00000574755 C11orf49Q9H6J7 331 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 POPDC3Q9HBV1 291 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 EML4Q9HC35 981 aaKnown RBP14.04□□□□□ -0.16
VPS33B-208ENST00000574755 LHX3Q9UBR4 397 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 G3BP2Q9UN86 482 aaKnown RBP14.04□□□□□ -0.16
VPS33B-208ENST00000574755 SSX2IPQ9Y2D8 614 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 C15orf41Q9Y2V0 281 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 ASB3Q9Y575 518 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 DENND4CQ5VZ89 1909 aa14.04□□□□□ -0.16
VPS33B-208ENST00000574755 PTPRSQ13332 1948 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 F8W8V4 182 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 LILRB3O75022 631 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 NDUFS3O75489 264 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 COX4I1P13073 169 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 CD1DP15813 335 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 CDC25CP30307 473 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 KCNC1P48547 511 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 SUOXP51687 545 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 TIAL1Q01085 375 aaKnown RBP eCLIP14.03□□□□□ -0.16
VPS33B-208ENST00000574755 PEX6Q13608 980 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 C6orf163Q5TEZ5 329 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms