RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 SDR16C5Q8N3Y7 309 aa17.44■□□□□ 0.38
SMG6-214ENST00000573827 KYQ8NBH2 561 aa17.44■□□□□ 0.38
SMG6-214ENST00000573827 SNIP1Q8TAD8 396 aaKnown RBP17.44■□□□□ 0.38
SMG6-214ENST00000573827 MAPK15Q8TD08 544 aa17.44■□□□□ 0.38
SMG6-214ENST00000573827 PTCD2Q8WV60 388 aaKnown RBP17.44■□□□□ 0.38
SMG6-214ENST00000573827 TEX101Q9BY14 249 aa17.44■□□□□ 0.38
SMG6-214ENST00000573827 POLR1EQ9GZS1 481 aaKnown RBP17.44■□□□□ 0.38
SMG6-214ENST00000573827 MRPL40Q9NQ50 206 aaKnown RBP17.44■□□□□ 0.38
SMG6-214ENST00000573827 AMACRQ9UHK6 382 aa17.44■□□□□ 0.38
SMG6-214ENST00000573827 RABGEF1Q9UJ41 708 aa17.44■□□□□ 0.38
SMG6-214ENST00000573827 UNC13CQ8NB66 2214 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 PSMD11O00231 422 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 CSO75390 466 aaKnown RBP17.43■□□□□ 0.38
SMG6-214ENST00000573827 HLA-DQB2P05538 268 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 MMP2P08253 660 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 ALPIP09923 528 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 TEAD1P28347 426 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 ARHGAP25P42331 645 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 TCEA2Q15560 299 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 ISXQ2M1V0 245 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 COL28A1Q2UY09 1125 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 ARMC12Q5T9G4 340 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 SLC9A4Q6AI14 798 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 CRTC1Q6UUV9 634 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 Q6ZVL8 140 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 RD3Q7Z3Z2 195 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 MAP7D3Q8IWC1 876 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 SFTPA2Q8IWL1 248 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 CNTD1Q8N815 330 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 ARL10Q8N8L6 244 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 TC2NQ8N9U0 490 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 OR56A4Q8NGH8 313 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 PDCD6IPQ8WUM4 868 aaKnown RBP17.43■□□□□ 0.38
SMG6-214ENST00000573827 NSMCE1Q8WV22 266 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 HDAC11Q96DB2 347 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 NUS1Q96E22 293 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 CCDC42Q96M95 316 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 TDRD1Q9BXT4 1180 aaKnown RBP17.43■□□□□ 0.38
SMG6-214ENST00000573827 DEF6Q9H4E7 631 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 WDR26Q9H7D7 661 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 RBM22Q9NW64 420 aaKnown RBP eCLIP17.43■□□□□ 0.38
SMG6-214ENST00000573827 ZNHIT6Q9NWK9 470 aaKnown RBP17.43■□□□□ 0.38
SMG6-214ENST00000573827 PADI4Q9UM07 663 aa17.43■□□□□ 0.38
SMG6-214ENST00000573827 A0A0J9YYE9 177 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 CACNB4O00305 520 aaPredicted RBP17.42■□□□□ 0.38
SMG6-214ENST00000573827 NTN3O00634 580 aaPredicted RBP17.42■□□□□ 0.38
SMG6-214ENST00000573827 DXOO77932 396 aaKnown RBP17.42■□□□□ 0.38
SMG6-214ENST00000573827 TRBC1P01850 177 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 CEACAM5P06731 702 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 CCNB1P14635 433 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 CTPS1P17812 591 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 EIF2S3P41091 472 aaKnown RBP17.42■□□□□ 0.38
SMG6-214ENST00000573827 PTSQ03393 145 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 DPTQ07507 201 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 PPIDQ08752 370 aaKnown RBP17.42■□□□□ 0.38
SMG6-214ENST00000573827 TAZQ16635 292 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 FAM182AQ5T1J6 154 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 LRRC38Q5VT99 294 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 TIGD7Q6NT04 549 aaPredicted RBP17.42■□□□□ 0.38
SMG6-214ENST00000573827 OGFOD3Q6PK18 319 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 GPR156Q8NFN8 814 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 ATL2Q8NHH9 583 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 CCL4L1Q8NHW4 92 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 TPCN2Q8NHX9 752 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 HNRNPLLQ8WVV9 542 aaKnown RBP17.42■□□□□ 0.38
SMG6-214ENST00000573827 CRELD1Q96HD1 420 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 OLFM3Q96PB7 478 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 DEPDC7Q96QD5 511 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 LGMNQ99538 433 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 FRMD8Q9BZ67 464 aaPredicted RBP17.42■□□□□ 0.38
SMG6-214ENST00000573827 TMEM168Q9H0V1 697 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 EVA1BQ9NVM1 165 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 INTUQ9ULD6 942 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 ST14Q9Y5Y6 855 aa17.42■□□□□ 0.38
SMG6-214ENST00000573827 NOBOXO60393 691 aa17.41■□□□□ 0.38
SMG6-214ENST00000573827 TNFP01375 233 aa17.41■□□□□ 0.38
SMG6-214ENST00000573827 CYP2A6P11509 494 aaPredicted RBP17.41■□□□□ 0.38
SMG6-214ENST00000573827 MYCLP1P12525 358 aaPredicted RBP17.41■□□□□ 0.38
SMG6-214ENST00000573827 MX2P20592 715 aa17.41■□□□□ 0.38
SMG6-214ENST00000573827 CES1P23141 567 aa17.41■□□□□ 0.38
SMG6-214ENST00000573827 IFI35P80217 286 aaPredicted RBP17.41■□□□□ 0.38
SMG6-214ENST00000573827 ZBTB17Q13105 803 aa17.41■□□□□ 0.38
SMG6-214ENST00000573827 TBC1D25Q3MII6 688 aa17.41■□□□□ 0.38
SMG6-214ENST00000573827 LRRC66Q68CR7 880 aa17.41■□□□□ 0.38
SMG6-214ENST00000573827 HEATR4Q86WZ0 1026 aa17.41■□□□□ 0.38
SMG6-214ENST00000573827 NRROSQ86YC3 692 aa17.41■□□□□ 0.38
SMG6-214ENST00000573827 CNGA4Q8IV77 575 aa17.41■□□□□ 0.38
SMG6-214ENST00000573827 RHOT2Q8IXI1 618 aa17.41■□□□□ 0.38
SMG6-214ENST00000573827 NAT6Q93015 286 aa17.41■□□□□ 0.38
SMG6-214ENST00000573827 PRR11Q96HE9 360 aaPredicted RBP17.41■□□□□ 0.38
SMG6-214ENST00000573827 HIC2Q96JB3 615 aa17.41■□□□□ 0.38
SMG6-214ENST00000573827 LYSMD1Q96S90 227 aa17.41■□□□□ 0.38
SMG6-214ENST00000573827 CCDC3Q9BQI4 270 aa17.41■□□□□ 0.38
SMG6-214ENST00000573827 ASCL3Q9NQ33 180 aa17.41■□□□□ 0.38
SMG6-214ENST00000573827 ENTPD2Q9Y5L3 495 aa17.41■□□□□ 0.38
SMG6-214ENST00000573827 AK5Q9Y6K8 562 aa17.41■□□□□ 0.38
SMG6-214ENST00000573827 HELZ2Q9BYK8 2649 aaKnown RBP17.41■□□□□ 0.38
SMG6-214ENST00000573827 BAHCC1Q9P281 2608 aa17.41■□□□□ 0.38
SMG6-214ENST00000573827 PRSS38A1L453 326 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 LRRD1A4D1F6 860 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms