RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 KCTD5Q9NXV2 234 aa20.69■□□□□ 0.9
CHMP6-204ENST00000572778 CNOT1A5YKK6 2376 aaKnown RBP20.69■□□□□ 0.9
CHMP6-204ENST00000572778 GOLGA6CA6NDK9 693 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 GOLGA6BA6NDN3 693 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 CAPN8A6NHC0 703 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 ENC1O14682 589 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 FFAR2O15552 330 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 TRIM16O95361 564 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 TOP3BO95985 862 aaKnown RBP20.68■□□□□ 0.9
CHMP6-204ENST00000572778 GOLGA6DP0CG33 693 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 EIF3EP60228 445 aaKnown RBP20.68■□□□□ 0.9
CHMP6-204ENST00000572778 CCZ1BP86790 482 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 CCZ1P86791 482 aaPredicted RBP20.68■□□□□ 0.9
CHMP6-204ENST00000572778 GALNT3Q14435 633 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 NFATC4Q14934 902 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 QPCTQ16769 361 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 HS1BP3Q53T59 392 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 ESRP1Q6NXG1 681 aaKnown RBP20.68■□□□□ 0.9
CHMP6-204ENST00000572778 PID1Q7Z2X4 250 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 PHACTR4Q8IZ21 702 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 RBFAQ8N0V3 343 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 CBARPQ8N350 705 aaPredicted RBP20.68■□□□□ 0.9
CHMP6-204ENST00000572778 LMX1AQ8TE12 382 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 BTN2A2Q8WVV5 523 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 DTD2Q96FN9 168 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 FAM118BQ9BPY3 351 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 TCEAL2Q9H3H9 227 aaPredicted RBP20.68■□□□□ 0.9
CHMP6-204ENST00000572778 LZTFL1Q9NQ48 299 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 GOLGA6AQ9NYA3 693 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 ANGPTL2Q9UKU9 493 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 DNPEPQ9ULA0 475 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 SPTBN2O15020 2390 aa20.68■□□□□ 0.9
CHMP6-204ENST00000572778 NEMP2A6NFY4 417 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 ANKRD66B4E2M5 251 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 F5H423 210 aaPredicted RBP20.67■□□□□ 0.9
CHMP6-204ENST00000572778 K7ESM1 405 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 CACNB4O00305 520 aaPredicted RBP20.67■□□□□ 0.9
CHMP6-204ENST00000572778 TRIM38O00635 465 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 MT-CYBP00156 380 aaPredicted RBP20.67■□□□□ 0.9
CHMP6-204ENST00000572778 ZNF30P17039 623 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 NFKB1P19838 968 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 SPINK2P20155 84 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 RBL1P28749 1068 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 CD68P34810 354 aaPredicted RBP20.67■□□□□ 0.9
CHMP6-204ENST00000572778 PPARDQ03181 441 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 PTSQ03393 145 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 PNCKQ6P2M8 343 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 RD3Q7Z3Z2 195 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 HID1Q8IV36 788 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 ZNF567Q8N184 647 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 PELI3Q8N2H9 469 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 ZNF548Q8NEK5 533 aaPredicted RBP20.67■□□□□ 0.9
CHMP6-204ENST00000572778 ATL2Q8NHH9 583 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 TSACCQ96A04 125 aaPredicted RBP20.67■□□□□ 0.9
CHMP6-204ENST00000572778 FUBP1Q96AE4 644 aaKnown RBP20.67■□□□□ 0.9
CHMP6-204ENST00000572778 HES6Q96HZ4 224 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 WDR92Q96MX6 357 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 VAT1Q99536 393 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 FERMT1Q9BQL6 677 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 SLC13A1Q9BZW2 595 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 UBP1Q9NZI7 540 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 APOBEC3BQ9UH17 382 aaKnown RBP20.67■□□□□ 0.9
CHMP6-204ENST00000572778 CD84Q9UIB8 345 aa20.67■□□□□ 0.9
CHMP6-204ENST00000572778 PNMA8BQ9ULN7 279 aaPredicted RBP20.67■□□□□ 0.9
CHMP6-204ENST00000572778 ANKRD36A6QL64 1941 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 GOLGA6L9A6NEM1 432 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 AQP9O43315 295 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 SIGLEC6O43699 453 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 HYAL3O43820 417 aaPredicted RBP20.66■□□□□ 0.9
CHMP6-204ENST00000572778 PMPCBO75439 489 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 CLDN7O95471 211 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 C1SP09871 688 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 ALPPL2P10696 532 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 RBP3P10745 1247 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 CDK18Q07002 472 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 DNAJC3Q13217 504 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 C1orf61Q13536 156 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 SLC14A2Q15849 920 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 CCDC70Q6NSX1 233 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 DARS2Q6PI48 645 aaKnown RBP20.66■□□□□ 0.9
CHMP6-204ENST00000572778 RFLNAQ6ZTI6 216 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 TECPR1Q7Z6L1 1165 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 CDKL3Q8IVW4 592 aaPredicted RBP20.66■□□□□ 0.9
CHMP6-204ENST00000572778 CHCHD4Q8N4Q1 142 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 OR4C6Q8NH72 309 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 TADA1Q96BN2 335 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 TRIB3Q96RU7 358 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 WDR26Q9H7D7 661 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 TOR4AQ9NXH8 423 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 SPASTQ9UBP0 616 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 KLQ9UEF7 1012 aa20.66■□□□□ 0.9
CHMP6-204ENST00000572778 NCOR2Q9Y618 2525 aa20.65■□□□□ 0.9
CHMP6-204ENST00000572778 C1orf232A0A0U1RR37 186 aa20.65■□□□□ 0.9
CHMP6-204ENST00000572778 SCAMP1O15126 338 aa20.65■□□□□ 0.9
CHMP6-204ENST00000572778 TSHRP16473 764 aa20.65■□□□□ 0.9
CHMP6-204ENST00000572778 TRIM23P36406 574 aa20.65■□□□□ 0.9
CHMP6-204ENST00000572778 BLKP51451 505 aa20.65■□□□□ 0.9
CHMP6-204ENST00000572778 STC1P52823 247 aa20.65■□□□□ 0.9
CHMP6-204ENST00000572778 SRP54P61011 504 aaKnown RBP20.65■□□□□ 0.9
CHMP6-204ENST00000572778 ALG11Q2TAA5 492 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms