RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 VPS26BQ4G0F5 336 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 LCN8Q6JVE9 175 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 GPR180Q86V85 440 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 PTGR2Q8N8N7 351 aaPredicted RBP10.77□□□□□ -0.69
CCDC40-207ENST00000572253 HSPBAP1Q96EW2 488 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 ZFP42Q96MM3 310 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 CXorf21Q9HAI6 301 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 PTGESO14684 152 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 IRAK2O43187 625 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 PAPSS2O95340 614 aaPredicted RBP10.77□□□□□ -0.69
CCDC40-207ENST00000572253 RENBPP51606 427 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 SLC14A2Q15849 920 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 CYP51A1Q16850 503 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 UNC50Q53HI1 259 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 ZNF789Q5FWF6 425 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 GALNT7Q86SF2 657 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 SLC15A3Q8IY34 581 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 KLHL23Q8NBE8 558 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 ZNF420Q8TAQ5 688 aaPredicted RBP10.77□□□□□ -0.69
CCDC40-207ENST00000572253 PPP1R13LQ8WUF5 828 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 TMEM40Q8WWA1 233 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 FCRL2Q96LA5 508 aaPredicted RBP10.77□□□□□ -0.69
CCDC40-207ENST00000572253 PPP1R10Q96QC0 940 aaKnown RBP10.77□□□□□ -0.69
CCDC40-207ENST00000572253 AGPAT4Q9NRZ5 378 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 FADS3Q9Y5Q0 445 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 POLR2AP24928 1970 aaKnown RBP10.77□□□□□ -0.69
CCDC40-207ENST00000572253 TYW5A2RUC4 315 aaKnown RBP10.76□□□□□ -0.69
CCDC40-207ENST00000572253 MBLAC1A4D2B0 266 aaPredicted RBP10.76□□□□□ -0.69
CCDC40-207ENST00000572253 FAM149AA5PLN7 773 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 INPP4BO15327 924 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 MOCS2O96007 188 aaPredicted RBP10.76□□□□□ -0.69
CCDC40-207ENST00000572253 THP07101 528 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 GFAPP14136 432 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 CDH13P55290 713 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 KCNK10P57789 538 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 NFYCQ13952 458 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 MFSD10Q14728 455 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 CILP2Q8IUL8 1156 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 FUNDC1Q8IVP5 155 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 TRPV3Q8NET8 790 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 TWIST2Q8WVJ9 160 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 NT5MQ9NPB1 228 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 ABCD2Q9UBJ2 740 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 DSEQ9UL01 958 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 HHLA1C9JL84 531 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 IDO1P14902 403 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 BDNFP23560 247 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 ENTPD1P49961 510 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 RAB15P59190 212 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 NFKB2Q00653 900 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 RETREG3Q86VR2 466 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 COLGALT2Q8IYK4 626 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 RTL3Q8N8U3 475 aaKnown RBP10.76□□□□□ -0.69
CCDC40-207ENST00000572253 ANKRD49Q8WVL7 239 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 BORCS5Q969J3 196 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 GPATCH1Q9BRR8 931 aaKnown RBP10.76□□□□□ -0.69
CCDC40-207ENST00000572253 YTHDF1Q9BYJ9 559 aaKnown RBP10.76□□□□□ -0.69
CCDC40-207ENST00000572253 KATNBL1Q9H079 304 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 MFSD1Q9H3U5 465 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 POLR1BQ9H9Y6 1135 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 ZNHIT2Q9UHR6 403 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 ANAPC2Q9UJX6 822 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 PIP5K1BO14986 540 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 ARPC2O15144 300 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 F2P00734 622 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 LDLRP01130 860 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 ODC1P11926 461 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 CAPGP40121 348 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 STT3AP46977 705 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 ATP6AP1Q15904 470 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 IFNEQ86WN2 208 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 RNF168Q8IYW5 571 aaPredicted RBP10.76□□□□□ -0.69
CCDC40-207ENST00000572253 TBC1D21Q8IYX1 336 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 OSCP1Q8WVF1 389 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 HDAC10Q969S8 669 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 LRRC58Q96CX6 371 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 MYRFLQ96LU7 910 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 KCTD14Q9BQ13 255 aaPredicted RBP10.76□□□□□ -0.69
CCDC40-207ENST00000572253 TRIM54Q9BYV2 358 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 ARNT2Q9HBZ2 717 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 ABCC13Q9NSE7 274 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 SMPD3Q9NY59 655 aaPredicted RBP10.76□□□□□ -0.69
CCDC40-207ENST00000572253 EBF1Q9UH73 591 aa10.76□□□□□ -0.69
CCDC40-207ENST00000572253 TRIM64CA6NLI5 447 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 M0QZ92 97 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 CBFA2T3O75081 653 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 RASAL1O95294 804 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 CHEK2O96017 543 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 ALDOCP09972 364 aaKnown RBP10.75□□□□□ -0.69
CCDC40-207ENST00000572253 UMPSP11172 480 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 CAPRIN1Q14444 709 aaKnown RBP10.75□□□□□ -0.69
CCDC40-207ENST00000572253 FSCN1Q16658 493 aaKnown RBP10.75□□□□□ -0.69
CCDC40-207ENST00000572253 COQ5Q5HYK3 327 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 NOMO2Q5JPE7 1267 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 MRNIPQ6NTE8 343 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 BEND5Q7L4P6 421 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 EFL1Q7Z2Z2 1120 aaKnown RBP10.75□□□□□ -0.69
CCDC40-207ENST00000572253 DEFB132Q7Z7B7 95 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 ISCA2Q86U28 154 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 SMYD1Q8NB12 490 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms