RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 SHROOM3Q8TF72 1996 aa20.68■□□□□ 0.9
LITAF-205ENST00000570904 PRSS38A1L453 326 aa20.68■□□□□ 0.9
LITAF-205ENST00000570904 NPIPB15A6NHN6 443 aaPredicted RBP20.68■□□□□ 0.9
LITAF-205ENST00000570904 B4DGG1 531 aa20.68■□□□□ 0.9
LITAF-205ENST00000570904 TNFRSF10CO14798 259 aa20.68■□□□□ 0.9
LITAF-205ENST00000570904 PGLSO95336 258 aa20.68■□□□□ 0.9
LITAF-205ENST00000570904 RPLP0P05388 317 aaKnown RBP20.68■□□□□ 0.9
LITAF-205ENST00000570904 CTPS1P17812 591 aa20.68■□□□□ 0.9
LITAF-205ENST00000570904 RBMS1P29558 406 aaKnown RBP20.68■□□□□ 0.9
LITAF-205ENST00000570904 CXADRP78310 365 aa20.68■□□□□ 0.9
LITAF-205ENST00000570904 ARMC12Q5T9G4 340 aa20.68■□□□□ 0.9
LITAF-205ENST00000570904 NCBP2-AS2Q69YL0 99 aa20.68■□□□□ 0.9
LITAF-205ENST00000570904 IGF2-ASQ6U949 168 aa20.68■□□□□ 0.9
LITAF-205ENST00000570904 B3GNT8Q7Z7M8 397 aa20.68■□□□□ 0.9
LITAF-205ENST00000570904 HEATR4Q86WZ0 1026 aa20.68■□□□□ 0.9
LITAF-205ENST00000570904 FAM46DQ8NEK8 389 aa20.68■□□□□ 0.9
LITAF-205ENST00000570904 GPR156Q8NFN8 814 aa20.68■□□□□ 0.9
LITAF-205ENST00000570904 KCNE4Q8WWG9 221 aa20.68■□□□□ 0.9
LITAF-205ENST00000570904 DTD2Q96FN9 168 aa20.68■□□□□ 0.9
LITAF-205ENST00000570904 SLC46A1Q96NT5 459 aa20.68■□□□□ 0.9
LITAF-205ENST00000570904 GFM1Q96RP9 751 aaKnown RBP20.68■□□□□ 0.9
LITAF-205ENST00000570904 PACSIN1Q9BY11 444 aa20.68■□□□□ 0.9
LITAF-205ENST00000570904 XPO4Q9C0E2 1151 aaKnown RBP20.68■□□□□ 0.9
LITAF-205ENST00000570904 CTTNBP2NLQ9P2B4 639 aa20.68■□□□□ 0.9
LITAF-205ENST00000570904 KIF26BQ2KJY2 2108 aa20.68■□□□□ 0.9
LITAF-205ENST00000570904 MGAQ8IWI9 3026 aa20.67■□□□□ 0.9
LITAF-205ENST00000570904 A0A0U1RQS6 177 aa20.67■□□□□ 0.9
LITAF-205ENST00000570904 A0A1W2PQM1 296 aa20.67■□□□□ 0.9
LITAF-205ENST00000570904 GOLGA6CA6NDK9 693 aa20.67■□□□□ 0.9
LITAF-205ENST00000570904 GOLGA6BA6NDN3 693 aa20.67■□□□□ 0.9
LITAF-205ENST00000570904 EIF4E1BA6NMX2 242 aaKnown RBP20.67■□□□□ 0.9
LITAF-205ENST00000570904 D6RAR5 112 aa20.67■□□□□ 0.9
LITAF-205ENST00000570904 NOBOXO60393 691 aa20.67■□□□□ 0.9
LITAF-205ENST00000570904 GOLGA6DP0CG33 693 aa20.67■□□□□ 0.9
LITAF-205ENST00000570904 MYCLP1P12525 358 aaPredicted RBP20.67■□□□□ 0.9
LITAF-205ENST00000570904 NFKBIAP25963 317 aa20.67■□□□□ 0.9
LITAF-205ENST00000570904 TAS2R40P59535 323 aa20.67■□□□□ 0.9
LITAF-205ENST00000570904 ITKQ08881 620 aa20.67■□□□□ 0.9
LITAF-205ENST00000570904 GALNT2Q10471 571 aa20.67■□□□□ 0.9
LITAF-205ENST00000570904 ZSCAN23Q3MJ62 389 aa20.67■□□□□ 0.9
LITAF-205ENST00000570904 RALGPS1Q5JS13 557 aa20.67■□□□□ 0.9
LITAF-205ENST00000570904 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.67■□□□□ 0.9
LITAF-205ENST00000570904 TEX26Q8N6G2 289 aa20.67■□□□□ 0.9
LITAF-205ENST00000570904 Q8N9G6 341 aaPredicted RBP20.67■□□□□ 0.9
LITAF-205ENST00000570904 WDR36Q8NI36 951 aaKnown RBP20.67■□□□□ 0.9
LITAF-205ENST00000570904 LRRN4Q8WUT4 740 aa20.67■□□□□ 0.9
LITAF-205ENST00000570904 SMIM14Q96QK8 99 aa20.67■□□□□ 0.9
LITAF-205ENST00000570904 MCCC1Q96RQ3 725 aaPredicted RBP20.67■□□□□ 0.9
LITAF-205ENST00000570904 SEMA3CQ99985 751 aa20.67■□□□□ 0.9
LITAF-205ENST00000570904 CARS2Q9HA77 564 aaKnown RBP20.67■□□□□ 0.9
LITAF-205ENST00000570904 PHPT1Q9NRX4 125 aaPredicted RBP20.67■□□□□ 0.9
LITAF-205ENST00000570904 GOLGA6AQ9NYA3 693 aa20.67■□□□□ 0.9
LITAF-205ENST00000570904 PCDHGA8Q9Y5G5 932 aa20.67■□□□□ 0.9
LITAF-205ENST00000570904 CCDC187A0A096LP49 1063 aa20.66■□□□□ 0.9
LITAF-205ENST00000570904 PROSCO94903 275 aa20.66■□□□□ 0.9
LITAF-205ENST00000570904 PDHA1P08559 390 aa20.66■□□□□ 0.9
LITAF-205ENST00000570904 GARSP41250 739 aaKnown RBP20.66■□□□□ 0.9
LITAF-205ENST00000570904 ARHGEF7Q14155 803 aa20.66■□□□□ 0.9
LITAF-205ENST00000570904 PAFAH1B3Q15102 231 aaKnown RBP20.66■□□□□ 0.9
LITAF-205ENST00000570904 RAET1GQ6H3X3 334 aa20.66■□□□□ 0.9
LITAF-205ENST00000570904 OGFOD3Q6PK18 319 aa20.66■□□□□ 0.9
LITAF-205ENST00000570904 Q6ZVL8 140 aa20.66■□□□□ 0.9
LITAF-205ENST00000570904 USP45Q70EL2 814 aa20.66■□□□□ 0.9
LITAF-205ENST00000570904 GPR155Q7Z3F1 870 aa20.66■□□□□ 0.9
LITAF-205ENST00000570904 LRRC49Q8IUZ0 686 aa20.66■□□□□ 0.9
LITAF-205ENST00000570904 CBARPQ8N350 705 aaPredicted RBP20.66■□□□□ 0.9
LITAF-205ENST00000570904 KCTD6Q8NC69 237 aa20.66■□□□□ 0.9
LITAF-205ENST00000570904 OR6C4Q8NGE1 309 aa20.66■□□□□ 0.9
LITAF-205ENST00000570904 PIH1D2Q8WWB5 315 aa20.66■□□□□ 0.9
LITAF-205ENST00000570904 SCRN2Q96FV2 425 aa20.66■□□□□ 0.9
LITAF-205ENST00000570904 FOXP3Q9BZS1 431 aa20.66■□□□□ 0.9
LITAF-205ENST00000570904 LRRN3Q9H3W5 708 aa20.66■□□□□ 0.9
LITAF-205ENST00000570904 EPB41L5Q9HCM4 733 aa20.66■□□□□ 0.9
LITAF-205ENST00000570904 TTLL3Q9Y4R7 772 aa20.66■□□□□ 0.9
LITAF-205ENST00000570904 PDE2AO00408 941 aaPredicted RBP20.65■□□□□ 0.9
LITAF-205ENST00000570904 KLK10O43240 276 aa20.65■□□□□ 0.9
LITAF-205ENST00000570904 HNRNPH3P31942 346 aaKnown RBP20.65■□□□□ 0.9
LITAF-205ENST00000570904 CDK3Q00526 305 aa20.65■□□□□ 0.9
LITAF-205ENST00000570904 DSC2Q02487 901 aa20.65■□□□□ 0.9
LITAF-205ENST00000570904 ANKRD20A8PQ5CZ79 823 aa20.65■□□□□ 0.9
LITAF-205ENST00000570904 CERCAMQ5T4B2 595 aa20.65■□□□□ 0.9
LITAF-205ENST00000570904 BROXQ5VW32 411 aa20.65■□□□□ 0.9
LITAF-205ENST00000570904 SPECC1LQ69YQ0 1117 aa20.65■□□□□ 0.9
LITAF-205ENST00000570904 RFLNAQ6ZTI6 216 aa20.65■□□□□ 0.9
LITAF-205ENST00000570904 CCNJLQ8IV13 435 aa20.65■□□□□ 0.9
LITAF-205ENST00000570904 PTCD2Q8WV60 388 aaKnown RBP20.65■□□□□ 0.9
LITAF-205ENST00000570904 ZNF670Q9BS34 389 aa20.65■□□□□ 0.9
LITAF-205ENST00000570904 TEX101Q9BY14 249 aa20.65■□□□□ 0.9
LITAF-205ENST00000570904 FRMD8Q9BZ67 464 aaPredicted RBP20.65■□□□□ 0.9
LITAF-205ENST00000570904 POLR1EQ9GZS1 481 aaKnown RBP20.65■□□□□ 0.9
LITAF-205ENST00000570904 DPEP2Q9H4A9 486 aa20.65■□□□□ 0.9
LITAF-205ENST00000570904 CPNE5Q9HCH3 593 aa20.65■□□□□ 0.9
LITAF-205ENST00000570904 KCTD5Q9NXV2 234 aa20.65■□□□□ 0.9
LITAF-205ENST00000570904 UVRAGQ9P2Y5 699 aa20.65■□□□□ 0.9
LITAF-205ENST00000570904 CD84Q9UIB8 345 aa20.65■□□□□ 0.9
LITAF-205ENST00000570904 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.65■□□□□ 0.9
LITAF-205ENST00000570904 RNF215Q9Y6U7 377 aa20.65■□□□□ 0.9
LITAF-205ENST00000570904 CDRT15L2A8MXV6 281 aa20.64■□□□□ 0.89
LITAF-205ENST00000570904 PSMD11O00231 422 aa20.64■□□□□ 0.89
LITAF-205ENST00000570904 FZD6O60353 706 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms