RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 RBM15Q96T37 977 aaKnown RBP eCLIP13.43□□□□□ -0.26
RPAIN-207ENST00000570883 APOOQ9BUR5 198 aa13.43□□□□□ -0.26
RPAIN-207ENST00000570883 OSBPL8Q9BZF1 889 aa13.43□□□□□ -0.26
RPAIN-207ENST00000570883 ANGPTL2Q9UKU9 493 aa13.43□□□□□ -0.26
RPAIN-207ENST00000570883 USP24Q9UPU5 2620 aa13.43□□□□□ -0.26
RPAIN-207ENST00000570883 DMXL2Q8TDJ6 3036 aa13.43□□□□□ -0.26
RPAIN-207ENST00000570883 ZNF106Q9H2Y7 1883 aaKnown RBP13.42□□□□□ -0.26
RPAIN-207ENST00000570883 PSMD11O00231 422 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 SIGLEC6O43699 453 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 LDOC1O95751 146 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-207ENST00000570883 C1SP09871 688 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 CYP2A6P11509 494 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-207ENST00000570883 JUNDP17535 347 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 CD68P34810 354 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-207ENST00000570883 RPL26P61254 145 aaKnown RBP13.42□□□□□ -0.26
RPAIN-207ENST00000570883 HNRNPKP61978 463 aaKnown RBP eCLIP13.42□□□□□ -0.26
RPAIN-207ENST00000570883 CCZ1BP86790 482 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 CCZ1P86791 482 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-207ENST00000570883 DNAJC3Q13217 504 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 ZNF211Q13398 564 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-207ENST00000570883 PTK2BQ14289 1009 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 NFATC4Q14934 902 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 QPCTQ16769 361 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 ALG11Q2TAA5 492 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 PROX2Q3B8N5 592 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 TEX44Q53QW1 395 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 LRRC66Q68CR7 880 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 ESRP1Q6NXG1 681 aaKnown RBP13.42□□□□□ -0.26
RPAIN-207ENST00000570883 Q6ZVL8 140 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 BZW1Q7L1Q6 419 aaKnown RBP13.42□□□□□ -0.26
RPAIN-207ENST00000570883 TECPR1Q7Z6L1 1165 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 LRRC8AQ8IWT6 810 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 PHACTR4Q8IZ21 702 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 CHCHD4Q8N4Q1 142 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 CCDC112Q8NEF3 446 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 OR4C6Q8NH72 309 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 SPATA22Q8NHS9 363 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 ADAMTS14Q8WXS8 1223 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 TEKT5Q96M29 485 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 FAM118BQ9BPY3 351 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 LRRC61Q9BV99 259 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 SLC25A51Q9H1U9 297 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 C10orf88Q9H8K7 445 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 GLOD4Q9HC38 313 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 KLK13Q9UKR3 277 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 AMFRQ9UKV5 643 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 RPL26L1Q9UNX3 145 aaKnown RBP13.42□□□□□ -0.26
RPAIN-207ENST00000570883 EFR3BQ9Y2G0 817 aa13.42□□□□□ -0.26
RPAIN-207ENST00000570883 ZZEF1O43149 2961 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 ENC1O14682 589 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 MT-CYBP00156 380 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-207ENST00000570883 SOD1P00441 154 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 CA4P22748 312 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 NFKBIAP25963 317 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 TRIM23P36406 574 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 ACADVLP49748 655 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 EPHB1P54762 984 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 KIAA1024LP59773 190 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 OTUD4Q01804 1114 aaKnown RBP13.41□□□□□ -0.26
RPAIN-207ENST00000570883 ARHGEF7Q14155 803 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 GALNT3Q14435 633 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 CDKN3Q16667 212 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 PNCKQ6P2M8 343 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 SYCE1Q8N0S2 351 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 ZNF567Q8N184 647 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 ACTL9Q8TC94 416 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 HTR3CQ8WXA8 447 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 PDXPQ96GD0 296 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 HES6Q96HZ4 224 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 LYSMD1Q96S90 227 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 SCNM1Q9BWG6 230 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 LGR4Q9BXB1 951 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 GRPEL1Q9HAV7 217 aa13.41□□□□□ -0.26
RPAIN-207ENST00000570883 APOBEC3BQ9UH17 382 aaKnown RBP13.41□□□□□ -0.26
RPAIN-207ENST00000570883 APOBEC2Q9Y235 224 aaKnown RBP13.41□□□□□ -0.26
RPAIN-207ENST00000570883 LY6G6EA0A0G2JKS1 128 aa13.4□□□□□ -0.26
RPAIN-207ENST00000570883 TMEM202A6NGA9 273 aa13.4□□□□□ -0.26
RPAIN-207ENST00000570883 MIF4GDA9UHW6 222 aaKnown RBP13.4□□□□□ -0.26
RPAIN-207ENST00000570883 HACD1B0YJ81 288 aa13.4□□□□□ -0.26
RPAIN-207ENST00000570883 H3BM21 787 aa13.4□□□□□ -0.26
RPAIN-207ENST00000570883 SCAMP1O15126 338 aa13.4□□□□□ -0.26
RPAIN-207ENST00000570883 GCATO75600 419 aa13.4□□□□□ -0.26
RPAIN-207ENST00000570883 TRIM16O95361 564 aa13.4□□□□□ -0.26
RPAIN-207ENST00000570883 CELA2BP08218 269 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-207ENST00000570883 NFKB1P19838 968 aa13.4□□□□□ -0.26
RPAIN-207ENST00000570883 RBL1P28749 1068 aa13.4□□□□□ -0.26
RPAIN-207ENST00000570883 STC1P52823 247 aa13.4□□□□□ -0.26
RPAIN-207ENST00000570883 PTSQ03393 145 aa13.4□□□□□ -0.26
RPAIN-207ENST00000570883 XRCC4Q13426 336 aa13.4□□□□□ -0.26
RPAIN-207ENST00000570883 SLC14A2Q15849 920 aa13.4□□□□□ -0.26
RPAIN-207ENST00000570883 PCSK7Q16549 785 aa13.4□□□□□ -0.26
RPAIN-207ENST00000570883 PRRT3Q5FWE3 981 aa13.4□□□□□ -0.26
RPAIN-207ENST00000570883 NDUFAF2Q8N183 169 aa13.4□□□□□ -0.26
RPAIN-207ENST00000570883 RNF10Q8N5U6 811 aaKnown RBP13.4□□□□□ -0.26
RPAIN-207ENST00000570883 LMX1AQ8TE12 382 aa13.4□□□□□ -0.26
RPAIN-207ENST00000570883 OR1E3Q8WZA6 343 aa13.4□□□□□ -0.26
RPAIN-207ENST00000570883 TSACCQ96A04 125 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-207ENST00000570883 WDR92Q96MX6 357 aa13.4□□□□□ -0.26
RPAIN-207ENST00000570883 TSGA10Q9BZW7 698 aa13.4□□□□□ -0.26
RPAIN-207ENST00000570883 CLPBQ9H078 707 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms