RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 RAPGEF1Q13905 1077 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 MANEALQ5VSG8 457 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 ERAP2Q6P179 960 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 BNIPLQ7Z465 357 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 MOCOSQ96EN8 888 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 EXOC2Q96KP1 924 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 ZMYND15Q9H091 742 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 SUV39H2Q9H5I1 410 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 WDR26Q9H7D7 661 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 TMEM248Q9NWD8 314 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 TRNAU1APQ9NX07 287 aaKnown RBP10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 ATP8A1Q9Y2Q0 1164 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 HIVEP1P15822 2718 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 POLR1CO15160 346 aaPredicted RBP10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 BUB1BO60566 1050 aaPredicted RBP10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 RAMP2O60895 175 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 KATNA1O75449 491 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 MYCLP1P12525 358 aaPredicted RBP10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 RHOQP17081 205 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 FLT3P36888 993 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 GNPDA1P46926 289 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 CTBSQ01459 385 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 LRRC63Q05C16 580 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 CCDC40Q4G0X9 1142 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 COBLL1Q53SF7 1204 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 INO80DQ53TQ3 878 aaPredicted RBP10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 TRNP1Q6NT89 227 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 RWDD4Q6NW29 188 aaKnown RBP10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 PNCKQ6P2M8 343 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 LIPIQ6XZB0 460 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 FAM131BQ86XD5 332 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 SLC34A3Q8N130 599 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 AHCYL2Q96HN2 611 aaKnown RBP10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 MAGEB5Q9BZ81 275 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 TWSG1Q9GZX9 223 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 KLC2Q9H0B6 622 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 SYNCQ9H7C4 482 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 MLXIPLQ9NP71 852 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 LUZP4Q9P127 313 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 RCOR3Q9P2K3 495 aaPredicted RBP10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 LHX3Q9UBR4 397 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 OR12D3Q9UGF7 316 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 KCND3Q9UK17 655 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 SUFUQ9UMX1 484 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 PLEKHM1Q9Y4G2 1056 aa10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 MDC1Q14676 2089 aaKnown RBP10.43□□□□□ -0.74
CTDNEP1-202ENST00000570380 TRBV23OR9-2A0A075B6M9 112 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 PIPSLA2A3N6 862 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 ZSCAN5CA6NGD5 496 aaPredicted RBP10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 FAM72CH0Y354 149 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 PDE2AO00408 941 aaPredicted RBP10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 INPP4BO15327 924 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 CREG1O75629 220 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 ADCY8P40145 1251 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 USP8P40818 1118 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 FASLGP48023 281 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 PPM1FP49593 454 aaPredicted RBP10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 PGDP52209 483 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 SNX16P57768 344 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 NRG1Q02297 640 aaPredicted RBP10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 CYTH1Q15438 398 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 KRTAP21-3Q3LHN1 58 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 RAB6CQ53S08 254 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 FAM72AQ5TYM5 149 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 ZNF658Q5TYW1 1059 aaPredicted RBP10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 FAM72DQ6L9T8 149 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 GJB7Q6PEY0 223 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 BRAT1Q6PJG6 821 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 WDR74Q6RFH5 385 aaPredicted RBP10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 C6orf15Q6UXA7 325 aaPredicted RBP10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 FAM72BQ86X60 149 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 CAMK1DQ8IU85 385 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 ZDHHC17Q8IUH5 632 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 TP53INP2Q8IXH6 220 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 Q8NA96 180 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 GALNT6Q8NCL4 622 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 OR10G6Q8NH81 332 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 CASKIN2Q8WXE0 1202 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 MARVELD3Q96A59 401 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 C5orf34Q96MH7 638 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 CFAP57Q96MR6 1250 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 SLC38A3Q99624 504 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 NCAPGQ9BPX3 1015 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 SLC25A23Q9BV35 468 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 FRMD8Q9BZ67 464 aaPredicted RBP10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 SLC29A3Q9BZD2 475 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 ULBP3Q9BZM4 244 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 RAB6CQ9H0N0 254 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 RETREG1Q9H6L5 497 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 NOL6Q9H6R4 1146 aaKnown RBP10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 PLCB1Q9NQ66 1216 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 TMEM51Q9NW97 253 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 NEU3Q9UQ49 428 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 SLC5A6Q9Y289 635 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 NF1P21359 2839 aa10.42□□□□□ -0.74
CTDNEP1-202ENST00000570380 HNRNPRO43390 633 aaKnown RBP10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 LRIG2O94898 1065 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 RECKO95980 971 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 ELFN1P0C7U0 828 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 ACTR1BP42025 376 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms