RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 ZNF30P17039 623 aa17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 MX2P20592 715 aa17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 LHCGRP22888 699 aa17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 MLLT3P42568 568 aaPredicted RBP17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 MAXP61244 160 aa17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 RPL26P61254 145 aaKnown RBP17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 ACOX1Q15067 660 aa17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 TSR1Q2NL82 804 aaKnown RBP17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 RBM44Q6ZP01 1051 aaKnown RBP17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 USP45Q70EL2 814 aa17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PDZD3Q86UT5 571 aa17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PQLC3Q8N755 202 aa17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PAF1Q8N7H5 531 aa17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 GPR156Q8NFN8 814 aa17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 OR1E3Q8WZA6 343 aa17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 TSPY26PQ9H489 355 aa17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 POLR1BQ9H9Y6 1135 aa17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 FGF22Q9HCT0 170 aa17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 NT5MQ9NPB1 228 aa17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 RALYQ9UKM9 306 aaKnown RBP17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 DNPEPQ9ULA0 475 aa17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 RPL26L1Q9UNX3 145 aaKnown RBP17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 SCN8AQ9UQD0 1980 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 UNC13CQ8NB66 2214 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 CPED1A4D0V7 1026 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 NPIPB15A6NHN6 443 aaPredicted RBP17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 RRP8O43159 456 aaKnown RBP17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 AKR1B10O60218 316 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PNLIPP16233 465 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 SSR1P43307 286 aaKnown RBP17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 ABCG1P45844 678 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 LRRC38Q5VT99 294 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 KCTD16Q68DU8 428 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 C19orf48Q6RUI8 117 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 ZNF765Q7L2R6 523 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 TECPR1Q7Z6L1 1165 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 CPNE8Q86YQ8 564 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 RHOT2Q8IXI1 618 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 NDUFAF2Q8N183 169 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PELI3Q8N2H9 469 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 KYQ8NBH2 561 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 HNRNPLLQ8WVV9 542 aaKnown RBP17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 HIC2Q96JB3 615 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 LYSMD1Q96S90 227 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 SEMA3CQ99985 751 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 CCDC3Q9BQI4 270 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 DEF6Q9H4E7 631 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PHPT1Q9NRX4 125 aaPredicted RBP17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 APPL1Q9UKG1 709 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 INTUQ9ULD6 942 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 DOLKQ9UPQ8 538 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PCDHGA8Q9Y5G5 932 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 ENTPD2Q9Y5L3 495 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 RAI2Q9Y5P3 530 aa17.09■□□□□ 0.33
MAP1LC3B-208ENST00000570189 A0A0J9YYE9 177 aa17.08■□□□□ 0.32
MAP1LC3B-208ENST00000570189 USP12O75317 370 aa17.08■□□□□ 0.32
MAP1LC3B-208ENST00000570189 TRBC1P01850 177 aa17.08■□□□□ 0.32
MAP1LC3B-208ENST00000570189 KDELR1P24390 212 aa17.08■□□□□ 0.32
MAP1LC3B-208ENST00000570189 PDX1P52945 283 aa17.08■□□□□ 0.32
MAP1LC3B-208ENST00000570189 PPIDQ08752 370 aaKnown RBP17.08■□□□□ 0.32
MAP1LC3B-208ENST00000570189 SLC9A4Q6AI14 798 aa17.08■□□□□ 0.32
MAP1LC3B-208ENST00000570189 HSD11B1LQ7Z5J1 315 aa17.08■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CNGA4Q8IV77 575 aa17.08■□□□□ 0.32
MAP1LC3B-208ENST00000570189 SLC35G2Q8TBE7 412 aa17.08■□□□□ 0.32
MAP1LC3B-208ENST00000570189 ARRDC2Q8TBH0 407 aa17.08■□□□□ 0.32
MAP1LC3B-208ENST00000570189 GPBAR1Q8TDU6 330 aa17.08■□□□□ 0.32
MAP1LC3B-208ENST00000570189 PDCD6IPQ8WUM4 868 aaKnown RBP17.08■□□□□ 0.32
MAP1LC3B-208ENST00000570189 RNF157Q96PX1 679 aa17.08■□□□□ 0.32
MAP1LC3B-208ENST00000570189 LGR4Q9BXB1 951 aa17.08■□□□□ 0.32
MAP1LC3B-208ENST00000570189 TDRD1Q9BXT4 1180 aaKnown RBP17.08■□□□□ 0.32
MAP1LC3B-208ENST00000570189 FRMD8Q9BZ67 464 aaPredicted RBP17.08■□□□□ 0.32
MAP1LC3B-208ENST00000570189 NHEJ1Q9H9Q4 299 aaPredicted RBP17.08■□□□□ 0.32
MAP1LC3B-208ENST00000570189 ASCL3Q9NQ33 180 aa17.08■□□□□ 0.32
MAP1LC3B-208ENST00000570189 DTLQ9NZJ0 730 aa17.08■□□□□ 0.32
MAP1LC3B-208ENST00000570189 GPR34Q9UPC5 381 aa17.08■□□□□ 0.32
MAP1LC3B-208ENST00000570189 PRSS38A1L453 326 aa17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 C3orf70A6NLC5 250 aaPredicted RBP17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 PYGLP06737 847 aa17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 PDHA1P08559 390 aa17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CCNB1P14635 433 aa17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CA4P22748 312 aa17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 ETV3P41162 512 aa17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 GABREP78334 506 aa17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CDK3Q00526 305 aa17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 GBE1Q04446 702 aa17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 SLC10A2Q12908 348 aaPredicted RBP17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 TBX2Q13207 712 aaPredicted RBP17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 ARHGEF7Q14155 803 aa17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 IHHQ14623 411 aa17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CERCAMQ5T4B2 595 aa17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 SARM1Q6SZW1 724 aa17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 LRRC69Q6ZNQ3 347 aa17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 NYAP1Q6ZVC0 841 aa17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 HEATR4Q86WZ0 1026 aa17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 C17orf82Q86X59 251 aaPredicted RBP17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 PLD5Q8N7P1 536 aa17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 SCARF2Q96GP6 870 aaPredicted RBP17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 LIN37Q96GY3 246 aaPredicted RBP17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CCDC42Q96M95 316 aa17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CHP1Q99653 195 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms