RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	ANKRD33	Q7Z3H0	272 aa		12.03	□□□□□ -0.48
SPG7-222	ENST00000569820	DCP1B	Q8IZD4	617 aa	Known RBP	12.03	□□□□□ -0.48
SPG7-222	ENST00000569820	UNC5B	Q8IZJ1	945 aa		12.03	□□□□□ -0.48
SPG7-222	ENST00000569820	NETO2	Q8NC67	525 aa		12.03	□□□□□ -0.48
SPG7-222	ENST00000569820	FAM156A	Q8NDB6	213 aa		12.03	□□□□□ -0.48
SPG7-222	ENST00000569820	ZNF420	Q8TAQ5	688 aa	Predicted RBP	12.03	□□□□□ -0.48
SPG7-222	ENST00000569820	PTCD2	Q8WV60	388 aa	Known RBP	12.03	□□□□□ -0.48
SPG7-222	ENST00000569820	LRTOMT	Q8WZ04	291 aa		12.03	□□□□□ -0.48
SPG7-222	ENST00000569820	CDKL2	Q92772	493 aa		12.03	□□□□□ -0.48
SPG7-222	ENST00000569820	FUBP3	Q96I24	572 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
SPG7-222	ENST00000569820	MAEL	Q96JY0	434 aa	Known RBP	12.03	□□□□□ -0.48
SPG7-222	ENST00000569820	B3GALT6	Q96L58	329 aa		12.03	□□□□□ -0.48
SPG7-222	ENST00000569820	COG8	Q96MW5	612 aa		12.03	□□□□□ -0.48
SPG7-222	ENST00000569820	LGMN	Q99538	433 aa		12.03	□□□□□ -0.48
SPG7-222	ENST00000569820	CTRC	Q99895	268 aa		12.03	□□□□□ -0.48
SPG7-222	ENST00000569820	WDR55	Q9H6Y2	383 aa	Predicted RBP	12.03	□□□□□ -0.48
SPG7-222	ENST00000569820	RPF2	Q9H7B2	306 aa	Known RBP	12.03	□□□□□ -0.48
SPG7-222	ENST00000569820	CXorf21	Q9HAI6	301 aa		12.03	□□□□□ -0.48
SPG7-222	ENST00000569820	GNPTG	Q9UJJ9	305 aa		12.03	□□□□□ -0.48
SPG7-222	ENST00000569820	SATB2	Q9UPW6	733 aa		12.03	□□□□□ -0.48
SPG7-222	ENST00000569820	HACD1	B0YJ81	288 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	PFDN6	O15212	129 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	KMO	O15229	486 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	SLC22A2	O15244	555 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	HTRA2	O43464	458 aa	Predicted RBP	12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	VAPB	O95292	243 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	CXCL10	P02778	98 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	INHBB	P09529	407 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	PCYT1A	P49585	367 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	IFRD2	Q12894	506 aa	Predicted RBP	12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	PTK2B	Q14289	1009 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	SPCS2	Q15005	226 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	SUZ12	Q15022	739 aa	Known RBP	12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	PHKG1	Q16816	387 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	RGS21	Q2M5E4	152 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	MTX3	Q5HYI7	312 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	PPM1J	Q5JR12	505 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	FAM171A1	Q5VUB5	890 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	HEATR6	Q6AI08	1181 aa	Known RBP	12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	LYSMD3	Q7Z3D4	306 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	SCD5	Q86SK9	330 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	NPAS4	Q8IUM7	802 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	TMA16	Q96EY4	203 aa	Known RBP	12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	CEP295NL	Q96MC4	621 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	CIB1	Q99828	191 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	TRIM62	Q9BVG3	475 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	EFCAB1	Q9HAE3	211 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	LRFN2	Q9ULH4	789 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	SNX13	Q9Y5W8	968 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820		A0A1W2PPW3	197 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	NOTO	A8MTQ0	251 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	PLOD2	O00469	737 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	TRIM38	O00635	465 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	TEX28	O15482	410 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	METTL18	O95568	372 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	UBL4A	P11441	157 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	RPL10	P27635	214 aa	Known RBP	12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	TYK2	P29597	1187 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	HCAR3	P49019	387 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	CCL23	P55773	120 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	EIF2B5	Q13144	721 aa	Known RBP	12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	RFTN1	Q14699	578 aa	Predicted RBP	12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	NFE2	Q16621	373 aa	Predicted RBP	12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	CTXN3	Q4LDR2	81 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	WDR45B	Q5MNZ6	344 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	CASC4	Q6P4E1	433 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	TTC33	Q6PID6	262 aa	Predicted RBP	12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	C4orf22	Q6V702	233 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	CYS1	Q717R9	158 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	PTAR1	Q7Z6K3	402 aa	Predicted RBP	12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	SCN4B	Q8IWT1	228 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	TP53INP2	Q8IXH6	220 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	ZNF786	Q8N393	782 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	HTR3C	Q8WXA8	447 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	ASB9	Q96DX5	294 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	PPP1R36	Q96LQ0	422 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	SLC29A1	Q99808	456 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	TKTL2	Q9H0I9	626 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	WDCP	Q9H6R7	721 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	C20orf96	Q9NUD7	363 aa	Predicted RBP	12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	KLHL3	Q9UH77	587 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	PTBP2	Q9UKA9	531 aa	Known RBP	12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	SNX10	Q9Y5X0	201 aa		12.02	□□□□□ -0.49
SPG7-222	ENST00000569820	LTBP2	Q14767	1821 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	IRAK2	O43187	625 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	SULT1C4	O75897	302 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	ERCC2	P18074	760 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	GPR15	P49685	360 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	TPI1	P60174	286 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	NIPAL4	Q0D2K0	466 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	MOG	Q16653	247 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	LSM12	Q3MHD2	195 aa	Known RBP	12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	FGD3	Q5JSP0	725 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	EGFLAM	Q63HQ2	1017 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	NAPRT	Q6XQN6	538 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	SLC39A5	Q6ZMH5	540 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	TMEM173	Q86WV6	379 aa	Predicted RBP	12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	GRAMD2A	Q8IUY3	354 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	TNS4	Q8IZW8	715 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	TTC9B	Q8N6N2	239 aa		12.01	□□□□□ -0.49

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