RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 CLOCKO15516 846 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 NUAK1O60285 661 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 KDM1AO60341 852 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 UGT2B11O75310 529 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 PIGNO95427 931 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 MYL3P08590 195 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 SMIM10L2AP0DMW4 78 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 SMIM10L2BP0DMW5 78 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 HSD17B1P14061 328 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 GPD1P21695 349 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 ACVR2AP27037 513 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 PTPN9P43378 593 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 GRIA4P48058 902 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 FLT3LGP49771 235 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 CLCN3P51790 818 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 ATXN3P54252 364 aaPredicted RBP5.46□□□□□ -1.53
LINC01541-202ENST00000568095 BCAR1P56945 870 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 MGAT3Q09327 533 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 SQLEQ14534 574 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 MAPRE2Q15555 327 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 BOLA3Q53S33 107 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 TMTC4Q5T4D3 741 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 C6orf183Q5T699 404 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 ZNF618Q5T7W0 954 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 SH3PXD2AQ5TCZ1 1133 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 ALG1LQ6GMV1 187 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 FSTL4Q6MZW2 842 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 PLEKHG7Q6ZR37 379 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 CMC1Q7Z7K0 106 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 DHFR2Q86XF0 187 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 GALNT13Q8IUC8 556 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 BRSK2Q8IWQ3 736 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 LRRC71Q8N4P6 559 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 PIK3C3Q8NEB9 887 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 STYXQ8WUJ0 223 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 HPS1Q92902 700 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 CERS2Q96G23 380 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 FBXL20Q96IG2 436 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 YME1L1Q96TA2 773 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 TBCBQ99426 244 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 BTBD2Q9BX70 525 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 RAD21L1Q9H4I0 556 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 ATP13A3Q9H7F0 1226 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 MEAF6Q9HAF1 191 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 LRRC4Q9HBW1 653 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 SRA1Q9HD15 236 aaKnown RBP5.46□□□□□ -1.53
LINC01541-202ENST00000568095 HMG20AQ9NP66 347 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 ADA2Q9NZK5 511 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 GMIPQ9P107 970 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 IFT80Q9P2H3 777 aaPredicted RBP5.46□□□□□ -1.53
LINC01541-202ENST00000568095 NLRC5Q86WI3 1866 aa5.46□□□□□ -1.53
LINC01541-202ENST00000568095 NRCAMQ92823 1304 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 A0A096LPK6 155 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 C1orf232A0A0U1RR37 186 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 SMIM35A0A1B0GVV1 85 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 LRRIQ4A6NIV6 560 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 TRPC5OSA6NMA1 111 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 CENPBD1B2RD01 187 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 NEMP1O14524 444 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 SEPT4O43236 478 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 MYO1DO94832 1006 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 GNRH1P01148 92 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 AKR1A1P14550 325 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 TCN1P20061 433 aaPredicted RBP5.46□□□□□ -1.54
LINC01541-202ENST00000568095 TCEA1P23193 301 aaKnown RBP5.46□□□□□ -1.54
LINC01541-202ENST00000568095 MAP4P27816 1152 aaKnown RBP5.46□□□□□ -1.54
LINC01541-202ENST00000568095 SPRP35270 261 aaPredicted RBP5.46□□□□□ -1.54
LINC01541-202ENST00000568095 HADHAP40939 763 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 GPD2P43304 727 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 EFNA5P52803 228 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 CSE1LP55060 971 aaKnown RBP5.46□□□□□ -1.54
LINC01541-202ENST00000568095 PRAMEP78395 509 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 IRF9Q00978 393 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 E2F2Q14209 437 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 SNX17Q15036 470 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 CTF1Q16619 201 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 PUS10Q3MIT2 529 aaKnown RBP5.46□□□□□ -1.54
LINC01541-202ENST00000568095 TIGD2Q4W5G0 525 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 FAM209AQ5JX71 171 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 FAM182AQ5T1J6 154 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 EFCAB12Q6NXP0 572 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 KCNT2Q6UVM3 1135 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 GK5Q6ZS86 529 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 PTAR1Q7Z6K3 402 aaPredicted RBP5.46□□□□□ -1.54
LINC01541-202ENST00000568095 TMEM135Q86UB9 458 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 CMTR2Q8IYT2 770 aaKnown RBP5.46□□□□□ -1.54
LINC01541-202ENST00000568095 ADGRG5Q8IZF4 528 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 ELMOD1Q8N336 334 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 PCDH20Q8N6Y1 951 aaKnown RBP5.46□□□□□ -1.54
LINC01541-202ENST00000568095 LILRB4Q8NHJ6 448 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 SPPL2BQ8TCT7 592 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 ROPN1LQ96C74 230 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 FCRL3Q96P31 734 aaPredicted RBP5.46□□□□□ -1.54
LINC01541-202ENST00000568095 IER2Q9BTL4 223 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 C11orf84Q9BUA3 381 aaPredicted RBP5.46□□□□□ -1.54
LINC01541-202ENST00000568095 LHPPQ9H008 270 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 SP140LQ9H930 580 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 CPNE5Q9HCH3 593 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 SRRDQ9UH36 339 aa5.46□□□□□ -1.54
LINC01541-202ENST00000568095 SFMBT1Q9UHJ3 866 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms