RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 SAMD15Q9P1V8 674 aa14.82□□□□□ -0.04
SPG7-213ENST00000566221 PLXNB3Q9ULL4 1909 aa14.82□□□□□ -0.04
SPG7-213ENST00000566221 TP53BP1Q12888 1972 aaPredicted RBP14.82□□□□□ -0.04
SPG7-213ENST00000566221 SPTBN4Q9H254 2564 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 ABCA7Q8IZY2 2146 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 CFAP54Q96N23 3096 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 SDR42E2A6NKP2 422 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 C2orf81A6NN90 581 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 EIF3HO15372 352 aaKnown RBP eCLIP14.81□□□□□ -0.04
SPG7-213ENST00000566221 AVILO75366 819 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 PCDH8O95206 1070 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 SEMA4FO95754 770 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 SLC4A1P02730 911 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 ADRA1DP25100 572 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 ACSL1P33121 698 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 SEMG2Q02383 582 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 DMWDQ09019 674 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 CBLBQ13191 982 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 MTM1Q13496 603 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 NAA30Q147X3 362 aaPredicted RBP14.81□□□□□ -0.04
SPG7-213ENST00000566221 PTPRRQ15256 657 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 CDKN3Q16667 212 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 MAP7D1Q3KQU3 841 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 ZNF528Q3MIS6 628 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 BBS9Q3SYG4 887 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 PCID2Q5JVF3 399 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 FNBP1LQ5T0N5 605 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 CASC4Q6P4E1 433 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 LIPIQ6XZB0 460 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 TSPAN33Q86UF1 283 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 LONP2Q86WA8 852 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 TTC30BQ8N4P2 665 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 TOE1Q96GM8 510 aaKnown RBP14.81□□□□□ -0.04
SPG7-213ENST00000566221 WRAP53Q9BUR4 548 aaKnown RBP14.81□□□□□ -0.04
SPG7-213ENST00000566221 TSPYL1Q9H0U9 437 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 MRM3Q9HC36 420 aaKnown RBP14.81□□□□□ -0.04
SPG7-213ENST00000566221 SYBUQ9NX95 663 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 WSB2Q9NYS7 404 aaPredicted RBP14.81□□□□□ -0.04
SPG7-213ENST00000566221 NFU1Q9UMS0 254 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 TCAF1Q9Y4C2 921 aa14.81□□□□□ -0.04
SPG7-213ENST00000566221 TBC1D3DA0A087WVF3 549 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 TBC1D3IA0A087WXS9 549 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 TBC1D3EA0A087X179 549 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 TBC1D3KA0A087X1G2 549 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 TBC1D3FA6NER0 549 aaPredicted RBP14.8□□□□□ -0.04
SPG7-213ENST00000566221 A8MX80 341 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 TBC1D3LB9A6J9 549 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 E7ESA3 106 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 CLDN7O95471 211 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 TBC1D3HP0C7X1 549 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 C6P13671 934 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 LPOP22079 712 aaPredicted RBP14.8□□□□□ -0.04
SPG7-213ENST00000566221 ECHS1P30084 290 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 HMGCLP35914 325 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 FNTBP49356 437 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 LIG3P49916 1009 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 ZNF140P52738 457 aaPredicted RBP14.8□□□□□ -0.04
SPG7-213ENST00000566221 STC1P52823 247 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 RPS21P63220 83 aaKnown RBP14.8□□□□□ -0.04
SPG7-213ENST00000566221 CRADDP78560 199 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 DHX9Q08211 1270 aaKnown RBP14.8□□□□□ -0.04
SPG7-213ENST00000566221 TCF15Q12870 199 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 DENND2CQ68D51 928 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 TBC1D3GQ6DHY5 549 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 TBC1D3CQ6IPX1 549 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 SLC36A4Q6YBV0 504 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 NLRP9Q7RTR0 991 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 TMC3Q7Z5M5 1100 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 TRIM69Q86WT6 500 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 RAVER1Q8IY67 606 aaKnown RBP14.8□□□□□ -0.04
SPG7-213ENST00000566221 TBC1D3Q8IZP1 549 aaPredicted RBP14.8□□□□□ -0.04
SPG7-213ENST00000566221 RLN3Q8WXF3 142 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 ATOH1Q92858 354 aaPredicted RBP14.8□□□□□ -0.04
SPG7-213ENST00000566221 PEX13Q92968 403 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 PWWP2AQ96N64 755 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 C19orf43Q9BQ61 176 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 NAT9Q9BTE0 207 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 PCED1AQ9H1Q7 454 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 EPC1Q9H2F5 836 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 PKD2L2Q9NZM6 624 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 RIMKLBQ9ULI2 386 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 SOX13Q9UN79 622 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 PKP3Q9Y446 797 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 ARL5AQ9Y689 179 aa14.8□□□□□ -0.04
SPG7-213ENST00000566221 MAGEB16A2A368 324 aa14.79□□□□□ -0.04
SPG7-213ENST00000566221 PRR23AA6NEV1 266 aa14.79□□□□□ -0.04
SPG7-213ENST00000566221 MROH6A6NGR9 719 aa14.79□□□□□ -0.04
SPG7-213ENST00000566221 FAM47DPA6NHR8 397 aa14.79□□□□□ -0.04
SPG7-213ENST00000566221 AURKAO14965 403 aa14.79□□□□□ -0.04
SPG7-213ENST00000566221 GALR2O43603 387 aaPredicted RBP14.79□□□□□ -0.04
SPG7-213ENST00000566221 LDB2O43679 373 aa14.79□□□□□ -0.04
SPG7-213ENST00000566221 RNGTTO60942 597 aaKnown RBP14.79□□□□□ -0.04
SPG7-213ENST00000566221 NDUFS2O75306 463 aa14.79□□□□□ -0.04
SPG7-213ENST00000566221 C1SP09871 688 aa14.79□□□□□ -0.04
SPG7-213ENST00000566221 H2AFXP16104 143 aaPredicted RBP14.79□□□□□ -0.04
SPG7-213ENST00000566221 VSNL1P62760 191 aa14.79□□□□□ -0.04
SPG7-213ENST00000566221 PDIA2Q13087 525 aaKnown RBP14.79□□□□□ -0.04
SPG7-213ENST00000566221 ANGPT1Q15389 498 aa14.79□□□□□ -0.04
SPG7-213ENST00000566221 MSS51Q4VC12 460 aa14.79□□□□□ -0.04
SPG7-213ENST00000566221 TMEM259Q4ZIN3 620 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms