RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 ACACAQ13085 2346 aa16.74■□□□□ 0.27
USB1-211ENST00000565662 A0A0J9YYE9 177 aa16.74■□□□□ 0.27
USB1-211ENST00000565662 CAPN8A6NHC0 703 aa16.74■□□□□ 0.27
USB1-211ENST00000565662 RRP8O43159 456 aaKnown RBP16.74■□□□□ 0.27
USB1-211ENST00000565662 FZD6O60353 706 aa16.74■□□□□ 0.27
USB1-211ENST00000565662 LCA5LO95447 670 aa16.74■□□□□ 0.27
USB1-211ENST00000565662 TRBC1P01850 177 aa16.74■□□□□ 0.27
USB1-211ENST00000565662 KRT1P04264 644 aa16.74■□□□□ 0.27
USB1-211ENST00000565662 PNLIPP16233 465 aa16.74■□□□□ 0.27
USB1-211ENST00000565662 ITIH2P19823 946 aa16.74■□□□□ 0.27
USB1-211ENST00000565662 MAXP61244 160 aa16.74■□□□□ 0.27
USB1-211ENST00000565662 IGF2-ASQ6U949 168 aa16.74■□□□□ 0.27
USB1-211ENST00000565662 RBM44Q6ZP01 1051 aaKnown RBP16.74■□□□□ 0.27
USB1-211ENST00000565662 TP53INP2Q8IXH6 220 aa16.74■□□□□ 0.27
USB1-211ENST00000565662 RBFAQ8N0V3 343 aa16.74■□□□□ 0.27
USB1-211ENST00000565662 CCHCR1Q8TD31 782 aa16.74■□□□□ 0.27
USB1-211ENST00000565662 RBM41Q96IZ5 413 aaKnown RBP16.74■□□□□ 0.27
USB1-211ENST00000565662 PANX2Q96RD6 677 aa16.74■□□□□ 0.27
USB1-211ENST00000565662 TEX101Q9BY14 249 aa16.74■□□□□ 0.27
USB1-211ENST00000565662 GSDMCQ9BYG8 508 aa16.74■□□□□ 0.27
USB1-211ENST00000565662 TRNAU1APQ9NX07 287 aaKnown RBP16.74■□□□□ 0.27
USB1-211ENST00000565662 AK5Q9Y6K8 562 aa16.74■□□□□ 0.27
USB1-211ENST00000565662 FRYQ5TBA9 3013 aa16.73■□□□□ 0.27
USB1-211ENST00000565662 MYLKQ15746 1914 aa16.73■□□□□ 0.27
USB1-211ENST00000565662 PRSS38A1L453 326 aa16.73■□□□□ 0.27
USB1-211ENST00000565662 FAM149AA5PLN7 773 aa16.73■□□□□ 0.27
USB1-211ENST00000565662 YY2O15391 372 aa16.73■□□□□ 0.27
USB1-211ENST00000565662 DXOO77932 396 aaKnown RBP16.73■□□□□ 0.27
USB1-211ENST00000565662 TGM2P21980 687 aa16.73■□□□□ 0.27
USB1-211ENST00000565662 MAGEA1P43355 309 aa16.73■□□□□ 0.27
USB1-211ENST00000565662 NOP2P46087 812 aaKnown RBP16.73■□□□□ 0.27
USB1-211ENST00000565662 CYP4F3Q08477 520 aa16.73■□□□□ 0.27
USB1-211ENST00000565662 ILF3Q12906 894 aaKnown RBP eCLIP16.73■□□□□ 0.27
USB1-211ENST00000565662 EIF3IQ13347 325 aaKnown RBP16.73■□□□□ 0.27
USB1-211ENST00000565662 CLPPQ16740 277 aaPredicted RBP16.73■□□□□ 0.27
USB1-211ENST00000565662 TPRG1LQ5T0D9 272 aa16.73■□□□□ 0.27
USB1-211ENST00000565662 RAET1GQ6H3X3 334 aa16.73■□□□□ 0.27
USB1-211ENST00000565662 C11orf63Q6NUN7 778 aa16.73■□□□□ 0.27
USB1-211ENST00000565662 LRRC69Q6ZNQ3 347 aa16.73■□□□□ 0.27
USB1-211ENST00000565662 EFL1Q7Z2Z2 1120 aaKnown RBP16.73■□□□□ 0.27
USB1-211ENST00000565662 TMTC1Q8IUR5 882 aa16.73■□□□□ 0.27
USB1-211ENST00000565662 PQLC3Q8N755 202 aa16.73■□□□□ 0.27
USB1-211ENST00000565662 SNIP1Q8TAD8 396 aaKnown RBP16.73■□□□□ 0.27
USB1-211ENST00000565662 MDM1Q8TC05 714 aa16.73■□□□□ 0.27
USB1-211ENST00000565662 PIH1D2Q8WWB5 315 aa16.73■□□□□ 0.27
USB1-211ENST00000565662 FUBP1Q96AE4 644 aaKnown RBP16.73■□□□□ 0.27
USB1-211ENST00000565662 VAT1Q99536 393 aa16.73■□□□□ 0.27
USB1-211ENST00000565662 PCDH9Q9HC56 1237 aa16.73■□□□□ 0.27
USB1-211ENST00000565662 PADI4Q9UM07 663 aa16.73■□□□□ 0.27
USB1-211ENST00000565662 A0A087WV48 116 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 LY6G6EA0A0G2JKS1 128 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 NPIPB15A6NHN6 443 aaPredicted RBP16.72■□□□□ 0.27
USB1-211ENST00000565662 GOLGA6L6A8MZA4 724 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 GCATO75600 419 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 CETN2P41208 172 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 ERVPABLB-1P60509 514 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 GBE1Q04446 702 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 LRP8Q14114 963 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 SPIDRQ14159 915 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 CDKN3Q16667 212 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 ATP13A4Q4VNC1 1196 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 CCDC70Q6NSX1 233 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 ADAMTSL4Q6UY14 1074 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 HEATR4Q86WZ0 1026 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 SLC35F3Q8IY50 421 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 CBARPQ8N350 705 aaPredicted RBP16.72■□□□□ 0.27
USB1-211ENST00000565662 PLD5Q8N7P1 536 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 TC2NQ8N9U0 490 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 RAPGEF5Q92565 580 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 TSACCQ96A04 125 aaPredicted RBP16.72■□□□□ 0.27
USB1-211ENST00000565662 ZNF578Q96N58 590 aaPredicted RBP16.72■□□□□ 0.27
USB1-211ENST00000565662 PKD2L2Q9NZM6 624 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 GPR34Q9UPC5 381 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 HEY1Q9Y5J3 304 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 U3KQA8 63 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 AKAP13Q12802 2813 aa16.72■□□□□ 0.27
USB1-211ENST00000565662 ANKRD11Q6UB99 2663 aaPredicted RBP16.71■□□□□ 0.27
USB1-211ENST00000565662 CPED1A4D0V7 1026 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 KRT37O76014 449 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 PRKCGP05129 697 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 IVLP07476 585 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 GLB1P16278 677 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 GPR1P46091 355 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 COPS2P61201 443 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 CDK3Q00526 305 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 AP1B1Q10567 949 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 TFDP3Q5H9I0 405 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 LRRC66Q68CR7 880 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 PDPK2PQ6A1A2 396 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 GUSBP11Q6P575 273 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 TAF8Q7Z7C8 310 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 RFX6Q8HWS3 928 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 EXD1Q8NHP7 514 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 UBE2Q2Q8WVN8 375 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 TMEM159Q96B96 161 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 AP2M1Q96CW1 435 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 CCDC97Q96F63 343 aaPredicted RBP16.71■□□□□ 0.27
USB1-211ENST00000565662 PDXPQ96GD0 296 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 OLFM3Q96PB7 478 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 MLPHQ9BV36 600 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms